RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 RRP7AQ9Y3A4 280 aaKnown RBP8.94□□□□□ -0.98
RTTN-211ENST00000638251 SMG6Q86US8 1419 aaKnown RBP8.94□□□□□ -0.98
RTTN-211ENST00000638251 ROBO2Q9HCK4 1378 aa8.94□□□□□ -0.98
RTTN-211ENST00000638251 TTC21BQ7Z4L5 1316 aa8.94□□□□□ -0.98
RTTN-211ENST00000638251 CEP170BQ9Y4F5 1589 aaPredicted RBP8.94□□□□□ -0.98
RTTN-211ENST00000638251 PTPRMP28827 1452 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
RTTN-211ENST00000638251 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 DIP2AQ14689 1571 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 PLEKHG3A1L390 1219 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 FCHSD2O94868 740 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 RIPK4P57078 832 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 TCP11L2Q8N4U5 519 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 KCNH5Q8NCM2 988 aa8.93□□□□□ -0.98
RTTN-211ENST00000638251 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
RTTN-211ENST00000638251 FTSJ3Q8IY81 847 aaKnown RBP8.92□□□□□ -0.98
RTTN-211ENST00000638251 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
RTTN-211ENST00000638251 NUTM2GQ5VZR2 741 aa8.92□□□□□ -0.98
RTTN-211ENST00000638251 LTV1Q96GA3 475 aaPredicted RBP8.92□□□□□ -0.98
RTTN-211ENST00000638251 MSH6P52701 1360 aa8.92□□□□□ -0.98
RTTN-211ENST00000638251 CHMP4BQ9H444 224 aaKnown RBP8.92□□□□□ -0.98
RTTN-211ENST00000638251 C19orf44Q9H6X5 657 aa8.92□□□□□ -0.98
RTTN-211ENST00000638251 SLIT1O75093 1534 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 TULP4Q9NRJ4 1543 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 PTCH1Q13635 1447 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 ADAMTS13Q76LX8 1427 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 RRS1Q15050 365 aaKnown RBP8.91□□□□□ -0.98
RTTN-211ENST00000638251 HMOX1P09601 288 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 WDR63Q8IWG1 891 aa8.91□□□□□ -0.98
RTTN-211ENST00000638251 FRAT1Q92837 279 aaPredicted RBP8.91□□□□□ -0.98
RTTN-211ENST00000638251 C3P01024 1663 aa8.9□□□□□ -0.98
RTTN-211ENST00000638251 TECPR2O15040 1411 aa8.9□□□□□ -0.98
RTTN-211ENST00000638251 IPO8O15397 1037 aaKnown RBP8.9□□□□□ -0.98
RTTN-211ENST00000638251 PRKAR2BP31323 418 aa8.9□□□□□ -0.98
RTTN-211ENST00000638251 HSPA2P54652 639 aa8.9□□□□□ -0.98
RTTN-211ENST00000638251 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
RTTN-211ENST00000638251 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.99
RTTN-211ENST00000638251 RRP1P56182 461 aaKnown RBP8.89□□□□□ -0.99
RTTN-211ENST00000638251 ARHGAP23Q9P227 1491 aa8.89□□□□□ -0.99
RTTN-211ENST00000638251 UBR1Q8IWV7 1749 aa8.89□□□□□ -0.99
RTTN-211ENST00000638251 ANKARQ7Z5J8 1434 aa8.89□□□□□ -0.99
RTTN-211ENST00000638251 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
RTTN-211ENST00000638251 ARHGEF28Q8N1W1 1705 aaKnown RBP8.88□□□□□ -0.99
RTTN-211ENST00000638251 MYO5BQ9ULV0 1848 aa8.88□□□□□ -0.99
RTTN-211ENST00000638251 GNAI1P63096 354 aa8.88□□□□□ -0.99
RTTN-211ENST00000638251 KRT28Q7Z3Y7 464 aa8.88□□□□□ -0.99
RTTN-211ENST00000638251 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
RTTN-211ENST00000638251 AEBP2Q6ZN18 517 aaPredicted RBP8.88□□□□□ -0.99
RTTN-211ENST00000638251 FOXO3O43524 673 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 SULT6B1Q6IMI4 303 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
RTTN-211ENST00000638251 C1orf141Q5JVX7 400 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 SMC4Q9NTJ3 1288 aa8.87□□□□□ -0.99
RTTN-211ENST00000638251 CPS1P31327 1500 aa8.86□□□□□ -0.99
RTTN-211ENST00000638251 TMPOP42166 694 aaKnown RBP8.86□□□□□ -0.99
RTTN-211ENST00000638251 NFE2L2Q16236 605 aa8.86□□□□□ -0.99
RTTN-211ENST00000638251 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
RTTN-211ENST00000638251 NPHP3Q7Z494 1330 aa8.86□□□□□ -0.99
RTTN-211ENST00000638251 CT47B1P0C2W7 299 aaPredicted RBP8.86□□□□□ -0.99
RTTN-211ENST00000638251 XPCQ01831 940 aaPredicted RBP8.85□□□□□ -0.99
RTTN-211ENST00000638251 SLFN5Q08AF3 891 aa8.85□□□□□ -0.99
RTTN-211ENST00000638251 PRR36Q9H6K5 1346 aa8.85□□□□□ -0.99
RTTN-211ENST00000638251 MED14O60244 1454 aa8.85□□□□□ -0.99
RTTN-211ENST00000638251 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
RTTN-211ENST00000638251 AATKQ6ZMQ8 1374 aa8.85□□□□□ -0.99
RTTN-211ENST00000638251 USP6P35125 1406 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 ZRANB1Q9UGI0 708 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 FLT4P35916 1363 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 EVA1CP58658 441 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 CCDC27Q2M243 656 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 PLEKHO1Q53GL0 409 aaPredicted RBP8.84□□□□□ -0.99
RTTN-211ENST00000638251 NCBP3Q53F19 620 aaKnown RBP8.84□□□□□ -0.99
RTTN-211ENST00000638251 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -0.99
RTTN-211ENST00000638251 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
RTTN-211ENST00000638251 PTPRUQ92729 1446 aa8.83□□□□□ -1
RTTN-211ENST00000638251 STK31Q9BXU1 1019 aa8.83□□□□□ -1
RTTN-211ENST00000638251 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
RTTN-211ENST00000638251 CDC42BPGQ6DT37 1551 aa8.83□□□□□ -1
RTTN-211ENST00000638251 ZKSCAN2Q63HK3 967 aa8.83□□□□□ -1
RTTN-211ENST00000638251 SBNO1A3KN83 1393 aa8.82□□□□□ -1
RTTN-211ENST00000638251 TMEM94Q12767 1356 aa8.82□□□□□ -1
RTTN-211ENST00000638251 NLRP2Q9NX02 1062 aa8.82□□□□□ -1
RTTN-211ENST00000638251 IL16Q14005 1332 aa8.82□□□□□ -1
RTTN-211ENST00000638251 NKTRP30414 1462 aaKnown RBP8.82□□□□□ -1
RTTN-211ENST00000638251 TEFQ10587 303 aa8.82□□□□□ -1
RTTN-211ENST00000638251 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
RTTN-211ENST00000638251 KIF16BQ96L93 1317 aa8.81□□□□□ -1
RTTN-211ENST00000638251 FBLN1P23142 703 aa8.81□□□□□ -1
RTTN-211ENST00000638251 AAMPQ13685 434 aa8.81□□□□□ -1
RTTN-211ENST00000638251 EIF4A2Q14240 407 aaKnown RBP8.81□□□□□ -1
RTTN-211ENST00000638251 ADAMTSL3P82987 1691 aa8.81□□□□□ -1
RTTN-211ENST00000638251 USP32Q8NFA0 1604 aa8.81□□□□□ -1
RTTN-211ENST00000638251 KNDC1Q76NI1 1749 aa8.8□□□□□ -1
RTTN-211ENST00000638251 ZNF428Q96B54 188 aa8.8□□□□□ -1
RTTN-211ENST00000638251 ORAI2Q96SN7 254 aa8.8□□□□□ -1
RTTN-211ENST00000638251 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
RTTN-211ENST00000638251 TATP17735 454 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms