RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ZMYM3Q14202 1370 aa19.43■□□□□ 0.7
LINC00552-201ENST00000625151 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
LINC00552-201ENST00000625151 ABCC11Q96J66 1382 aa19.43■□□□□ 0.7
LINC00552-201ENST00000625151 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
LINC00552-201ENST00000625151 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
LINC00552-201ENST00000625151 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
LINC00552-201ENST00000625151 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
LINC00552-201ENST00000625151 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
LINC00552-201ENST00000625151 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
LINC00552-201ENST00000625151 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
LINC00552-201ENST00000625151 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
LINC00552-201ENST00000625151 BECN1Q14457 450 aa19.4■□□□□ 0.7
LINC00552-201ENST00000625151 ESF1Q9H501 851 aaKnown RBP19.4■□□□□ 0.7
LINC00552-201ENST00000625151 STK26Q9P289 416 aa19.4■□□□□ 0.7
LINC00552-201ENST00000625151 U2SURPO15042 1029 aaKnown RBP19.39■□□□□ 0.7
LINC00552-201ENST00000625151 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.7
LINC00552-201ENST00000625151 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
LINC00552-201ENST00000625151 CEBPAP49715 358 aaPredicted RBP19.39■□□□□ 0.69
LINC00552-201ENST00000625151 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
LINC00552-201ENST00000625151 EXOSC9Q06265 439 aaKnown RBP19.39■□□□□ 0.69
LINC00552-201ENST00000625151 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
LINC00552-201ENST00000625151 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
LINC00552-201ENST00000625151 UBE2Q2Q8WVN8 375 aa19.38■□□□□ 0.69
LINC00552-201ENST00000625151 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
LINC00552-201ENST00000625151 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
LINC00552-201ENST00000625151 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
LINC00552-201ENST00000625151 TMEM131LA2VDJ0 1609 aa19.37■□□□□ 0.69
LINC00552-201ENST00000625151 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
LINC00552-201ENST00000625151 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
LINC00552-201ENST00000625151 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
LINC00552-201ENST00000625151 PTPRMP28827 1452 aa19.36■□□□□ 0.69
LINC00552-201ENST00000625151 ZFYVE9O95405 1425 aa19.36■□□□□ 0.69
LINC00552-201ENST00000625151 TRIM27P14373 513 aa19.36■□□□□ 0.69
LINC00552-201ENST00000625151 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
LINC00552-201ENST00000625151 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
LINC00552-201ENST00000625151 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
LINC00552-201ENST00000625151 FYB1O15117 783 aa19.34■□□□□ 0.69
LINC00552-201ENST00000625151 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
LINC00552-201ENST00000625151 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
LINC00552-201ENST00000625151 TBC1D2Q9BYX2 928 aa19.33■□□□□ 0.68
LINC00552-201ENST00000625151 ATAD2Q6PL18 1390 aa19.32■□□□□ 0.68
LINC00552-201ENST00000625151 MED14O60244 1454 aa19.32■□□□□ 0.68
LINC00552-201ENST00000625151 PRAM1Q96QH2 718 aa19.32■□□□□ 0.68
LINC00552-201ENST00000625151 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
LINC00552-201ENST00000625151 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
LINC00552-201ENST00000625151 TERF2IPQ9NYB0 399 aa19.31■□□□□ 0.68
LINC00552-201ENST00000625151 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
LINC00552-201ENST00000625151 HDAC1Q13547 482 aaPredicted RBP19.3■□□□□ 0.68
LINC00552-201ENST00000625151 POGKQ9P215 609 aa19.3■□□□□ 0.68
LINC00552-201ENST00000625151 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
LINC00552-201ENST00000625151 NOB1Q9ULX3 412 aaKnown RBP19.3■□□□□ 0.68
LINC00552-201ENST00000625151 RIPK4P57078 832 aa19.3■□□□□ 0.68
LINC00552-201ENST00000625151 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
LINC00552-201ENST00000625151 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
LINC00552-201ENST00000625151 IL16Q14005 1332 aa19.29■□□□□ 0.68
LINC00552-201ENST00000625151 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
LINC00552-201ENST00000625151 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
LINC00552-201ENST00000625151 TNRQ92752 1358 aa19.27■□□□□ 0.68
LINC00552-201ENST00000625151 DIAPH1O60610 1272 aaKnown RBP19.27■□□□□ 0.68
LINC00552-201ENST00000625151 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.67
LINC00552-201ENST00000625151 FER1L4A9Z1Z3 1794 aa19.26■□□□□ 0.67
LINC00552-201ENST00000625151 LRRC7Q96NW7 1537 aa19.26■□□□□ 0.67
LINC00552-201ENST00000625151 C3P01024 1663 aa19.25■□□□□ 0.67
LINC00552-201ENST00000625151 MFAP1P55081 439 aaKnown RBP19.25■□□□□ 0.67
LINC00552-201ENST00000625151 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
LINC00552-201ENST00000625151 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
LINC00552-201ENST00000625151 ZBTB40Q9NUA8 1239 aa19.25■□□□□ 0.67
LINC00552-201ENST00000625151 ALKQ9UM73 1620 aa19.24■□□□□ 0.67
LINC00552-201ENST00000625151 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
LINC00552-201ENST00000625151 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
LINC00552-201ENST00000625151 CDK19Q9BWU1 502 aa19.24■□□□□ 0.67
LINC00552-201ENST00000625151 CDC42BPGQ6DT37 1551 aa19.23■□□□□ 0.67
LINC00552-201ENST00000625151 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
LINC00552-201ENST00000625151 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
LINC00552-201ENST00000625151 FBLN1P23142 703 aa19.22■□□□□ 0.67
LINC00552-201ENST00000625151 MAP2P11137 1827 aaKnown RBP19.21■□□□□ 0.67
LINC00552-201ENST00000625151 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
LINC00552-201ENST00000625151 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
LINC00552-201ENST00000625151 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
LINC00552-201ENST00000625151 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
LINC00552-201ENST00000625151 FCHSD2O94868 740 aa19.19■□□□□ 0.66
LINC00552-201ENST00000625151 PRKAR2BP31323 418 aa19.19■□□□□ 0.66
LINC00552-201ENST00000625151 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
LINC00552-201ENST00000625151 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
LINC00552-201ENST00000625151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC00552-201ENST00000625151 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
LINC00552-201ENST00000625151 NUCB1Q02818 461 aa19.17■□□□□ 0.66
LINC00552-201ENST00000625151 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
LINC00552-201ENST00000625151 RIMS1Q86UR5 1692 aaKnown RBP19.16■□□□□ 0.66
LINC00552-201ENST00000625151 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
LINC00552-201ENST00000625151 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
LINC00552-201ENST00000625151 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
LINC00552-201ENST00000625151 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
LINC00552-201ENST00000625151 HMOX1P09601 288 aa19.14■□□□□ 0.65
LINC00552-201ENST00000625151 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
LINC00552-201ENST00000625151 MCM4P33991 863 aa19.13■□□□□ 0.65
LINC00552-201ENST00000625151 ATP7BP35670 1465 aa19.13■□□□□ 0.65
LINC00552-201ENST00000625151 BRPF1P55201 1214 aaPredicted RBP19.13■□□□□ 0.65
LINC00552-201ENST00000625151 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
LINC00552-201ENST00000625151 SETD1AO15047 1707 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms