RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
MSH6-215ENST00000622629 REC8O95072 547 aa15.83■□□□□ 0.12
MSH6-215ENST00000622629 CHD1LQ86WJ1 897 aa15.83■□□□□ 0.12
MSH6-215ENST00000622629 SLC26A8Q96RN1 970 aa15.83■□□□□ 0.12
MSH6-215ENST00000622629 CDC45O75419 566 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 NME9Q86XW9 330 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 TEFQ10587 303 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 ABCC10Q5T3U5 1492 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 TRAK2O60296 914 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
MSH6-215ENST00000622629 RLBP1P12271 317 aa15.81■□□□□ 0.12
MSH6-215ENST00000622629 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
MSH6-215ENST00000622629 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
MSH6-215ENST00000622629 GCC1Q96CN9 775 aa15.81■□□□□ 0.12
MSH6-215ENST00000622629 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
MSH6-215ENST00000622629 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
MSH6-215ENST00000622629 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
MSH6-215ENST00000622629 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
MSH6-215ENST00000622629 FYB1O15117 783 aa15.79■□□□□ 0.12
MSH6-215ENST00000622629 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
MSH6-215ENST00000622629 CHMP4AQ9BY43 222 aa15.78■□□□□ 0.12
MSH6-215ENST00000622629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.129e-9■■■■■ 31
MSH6-215ENST00000622629 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
MSH6-215ENST00000622629 PIK3C2GO75747 1445 aa15.77■□□□□ 0.12
MSH6-215ENST00000622629 MIS18AQ9NYP9 233 aa15.77■□□□□ 0.12
MSH6-215ENST00000622629 TBC1D2Q9BYX2 928 aa15.77■□□□□ 0.11
MSH6-215ENST00000622629 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.11
MSH6-215ENST00000622629 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
MSH6-215ENST00000622629 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 POLR3AO14802 1390 aaPredicted RBP15.76■□□□□ 0.11
MSH6-215ENST00000622629 MCM10Q7L590 875 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
MSH6-215ENST00000622629 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 KDM5CP41229 1560 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
MSH6-215ENST00000622629 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
MSH6-215ENST00000622629 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
MSH6-215ENST00000622629 MCM4P33991 863 aa15.75■□□□□ 0.11
MSH6-215ENST00000622629 GPATCH3Q96I76 525 aa15.75■□□□□ 0.11
MSH6-215ENST00000622629 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 SEC24BO95487 1268 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 PSME1Q06323 249 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
MSH6-215ENST00000622629 ZNF428Q96B54 188 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 C1orf141Q5JVX7 400 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
MSH6-215ENST00000622629 SYAP1Q96A49 352 aaPredicted RBP15.74■□□□□ 0.11
MSH6-215ENST00000622629 FAM83GA6ND36 823 aa15.73■□□□□ 0.11
MSH6-215ENST00000622629 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
MSH6-215ENST00000622629 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
MSH6-215ENST00000622629 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
MSH6-215ENST00000622629 ANKRD36BQ8N2N9 1353 aa15.73■□□□□ 0.11
MSH6-215ENST00000622629 HDAC5Q9UQL6 1122 aa15.72■□□□□ 0.11
MSH6-215ENST00000622629 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
MSH6-215ENST00000622629 NUCB2P80303 420 aa15.72■□□□□ 0.11
MSH6-215ENST00000622629 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
MSH6-215ENST00000622629 NEK4P51957 841 aa15.71■□□□□ 0.11
MSH6-215ENST00000622629 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
MSH6-215ENST00000622629 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
MSH6-215ENST00000622629 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
MSH6-215ENST00000622629 NSD2O96028 1365 aa15.71■□□□□ 0.11
MSH6-215ENST00000622629 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.1
MSH6-215ENST00000622629 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.1
MSH6-215ENST00000622629 ZCCHC11Q5TAX3 1644 aaKnown RBP15.71■□□□□ 0.1
MSH6-215ENST00000622629 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
MSH6-215ENST00000622629 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
MSH6-215ENST00000622629 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
MSH6-215ENST00000622629 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
MSH6-215ENST00000622629 MRE11P49959 708 aa15.7■□□□□ 0.1
MSH6-215ENST00000622629 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
MSH6-215ENST00000622629 PLA2R1Q13018 1463 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 GNAI3P08754 354 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 CCDC30Q5VVM6 783 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 ARID3AQ99856 593 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 IFT57Q9NWB7 429 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 GNAI2P04899 355 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
MSH6-215ENST00000622629 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
MSH6-215ENST00000622629 K7ELQ4 463 aaPredicted RBP15.68■□□□□ 0.1
MSH6-215ENST00000622629 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
MSH6-215ENST00000622629 RABEP1Q15276 862 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 AIMP1Q12904 312 aaKnown RBP15.68■□□□□ 0.1
MSH6-215ENST00000622629 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 EXOC6BQ9Y2D4 811 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
MSH6-215ENST00000622629 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
MSH6-215ENST00000622629 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
MSH6-215ENST00000622629 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
MSH6-215ENST00000622629 F6X3S4 739 aa15.67■□□□□ 0.1
MSH6-215ENST00000622629 IFIT2P09913 472 aaKnown RBP15.67■□□□□ 0.1
MSH6-215ENST00000622629 CAVIN1Q6NZI2 390 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms