RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
VPS11-206ENST00000614944 KCNA6P17658 529 aa11.65□□□□□ -0.54
VPS11-206ENST00000614944 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
VPS11-206ENST00000614944 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
VPS11-206ENST00000614944 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
VPS11-206ENST00000614944 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
VPS11-206ENST00000614944 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
VPS11-206ENST00000614944 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
VPS11-206ENST00000614944 STK26Q9P289 416 aa11.63□□□□□ -0.55
VPS11-206ENST00000614944 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
VPS11-206ENST00000614944 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
VPS11-206ENST00000614944 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
VPS11-206ENST00000614944 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
VPS11-206ENST00000614944 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
VPS11-206ENST00000614944 POLR3AO14802 1390 aaPredicted RBP11.61□□□□□ -0.55
VPS11-206ENST00000614944 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
VPS11-206ENST00000614944 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
VPS11-206ENST00000614944 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
VPS11-206ENST00000614944 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
VPS11-206ENST00000614944 A0A1W2PP64 1363 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 WAPLQ7Z5K2 1190 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 BRPF3Q9ULD4 1205 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
VPS11-206ENST00000614944 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
VPS11-206ENST00000614944 MST1RQ04912 1400 aa11.59□□□□□ -0.55
VPS11-206ENST00000614944 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
VPS11-206ENST00000614944 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
VPS11-206ENST00000614944 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
VPS11-206ENST00000614944 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
VPS11-206ENST00000614944 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
VPS11-206ENST00000614944 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
VPS11-206ENST00000614944 NCKAP5LQ9HCH0 1330 aa11.58□□□□□ -0.56
VPS11-206ENST00000614944 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.56
VPS11-206ENST00000614944 RGPD8O14715 1765 aaPredicted RBP11.58□□□□□ -0.56
VPS11-206ENST00000614944 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
VPS11-206ENST00000614944 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
VPS11-206ENST00000614944 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
VPS11-206ENST00000614944 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
VPS11-206ENST00000614944 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
VPS11-206ENST00000614944 FAM43AQ8N2R8 423 aa11.56□□□□□ -0.56
VPS11-206ENST00000614944 PRR36Q9H6K5 1346 aa11.55□□□□□ -0.56
VPS11-206ENST00000614944 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
VPS11-206ENST00000614944 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
VPS11-206ENST00000614944 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
VPS11-206ENST00000614944 USP6P35125 1406 aa11.55□□□□□ -0.56
VPS11-206ENST00000614944 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
VPS11-206ENST00000614944 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
VPS11-206ENST00000614944 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
VPS11-206ENST00000614944 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
VPS11-206ENST00000614944 TRPM3Q9HCF6 1732 aaPredicted RBP11.54□□□□□ -0.56
VPS11-206ENST00000614944 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
VPS11-206ENST00000614944 TTC21AQ8NDW8 1320 aa11.53□□□□□ -0.56
VPS11-206ENST00000614944 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
VPS11-206ENST00000614944 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
VPS11-206ENST00000614944 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
VPS11-206ENST00000614944 NEFMP07197 916 aa11.52□□□□□ -0.56
VPS11-206ENST00000614944 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
VPS11-206ENST00000614944 PIK3C2AO00443 1686 aa11.52□□□□□ -0.57
VPS11-206ENST00000614944 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
VPS11-206ENST00000614944 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
VPS11-206ENST00000614944 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
VPS11-206ENST00000614944 CABP1Q9NZU7 370 aa11.51□□□□□ -0.57
VPS11-206ENST00000614944 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
VPS11-206ENST00000614944 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
VPS11-206ENST00000614944 SAFB2Q14151 953 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS11-206ENST00000614944 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
VPS11-206ENST00000614944 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
VPS11-206ENST00000614944 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
VPS11-206ENST00000614944 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
VPS11-206ENST00000614944 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
VPS11-206ENST00000614944 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
VPS11-206ENST00000614944 CNKSR2Q8WXI2 1034 aa11.5□□□□□ -0.57
VPS11-206ENST00000614944 BCCIPQ9P287 314 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS11-206ENST00000614944 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
VPS11-206ENST00000614944 C19orf44Q9H6X5 657 aa11.49□□□□□ -0.57
VPS11-206ENST00000614944 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
VPS11-206ENST00000614944 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
VPS11-206ENST00000614944 C1orf167Q5SNV9 1468 aa11.48□□□□□ -0.57
VPS11-206ENST00000614944 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
VPS11-206ENST00000614944 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
VPS11-206ENST00000614944 FYB1O15117 783 aa11.48□□□□□ -0.57
VPS11-206ENST00000614944 ABCC6O95255 1503 aa11.48□□□□□ -0.57
VPS11-206ENST00000614944 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
VPS11-206ENST00000614944 RGS3P49796 1198 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 SLIT3O75094 1523 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 LTBP4Q8N2S1 1624 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 ACEP12821 1306 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
VPS11-206ENST00000614944 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
VPS11-206ENST00000614944 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
VPS11-206ENST00000614944 CRYBG1Q9Y4K1 1723 aa11.46□□□□□ -0.57
VPS11-206ENST00000614944 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
VPS11-206ENST00000614944 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.58
VPS11-206ENST00000614944 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.58
VPS11-206ENST00000614944 MORC1Q86VD1 984 aa11.46□□□□□ -0.58
VPS11-206ENST00000614944 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
VPS11-206ENST00000614944 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms