RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
SNPH-203ENST00000614659 DHX29Q7Z478 1369 aaKnown RBP17.87■□□□□ 0.45
SNPH-203ENST00000614659 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
SNPH-203ENST00000614659 TOMM22Q9NS69 142 aa17.87■□□□□ 0.45
SNPH-203ENST00000614659 KLHL34Q8N239 644 aa17.87■□□□□ 0.45
SNPH-203ENST00000614659 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
SNPH-203ENST00000614659 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
SNPH-203ENST00000614659 RIC3Q7Z5B4 369 aa17.86■□□□□ 0.45
SNPH-203ENST00000614659 WDR7Q9Y4E6 1490 aa17.86■□□□□ 0.45
SNPH-203ENST00000614659 MCM2P49736 904 aa17.86■□□□□ 0.45
SNPH-203ENST00000614659 HMOX1P09601 288 aa17.86■□□□□ 0.45
SNPH-203ENST00000614659 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNPH-203ENST00000614659 CCDC30Q5VVM6 783 aa17.85■□□□□ 0.45
SNPH-203ENST00000614659 TNRQ92752 1358 aa17.85■□□□□ 0.45
SNPH-203ENST00000614659 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
SNPH-203ENST00000614659 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
SNPH-203ENST00000614659 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
SNPH-203ENST00000614659 SCAF11Q99590 1463 aaKnown RBP17.85■□□□□ 0.45
SNPH-203ENST00000614659 ABCC11Q96J66 1382 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
SNPH-203ENST00000614659 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
SNPH-203ENST00000614659 GOLGA6L1Q8N7Z2 621 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 WDR62O43379 1518 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 PLCH2O75038 1416 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 MRE11P49959 708 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
SNPH-203ENST00000614659 NUP160Q12769 1436 aa17.83■□□□□ 0.45
SNPH-203ENST00000614659 RABEP1Q15276 862 aa17.83■□□□□ 0.45
SNPH-203ENST00000614659 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.45
SNPH-203ENST00000614659 NSD3Q9BZ95 1437 aa17.83■□□□□ 0.44
SNPH-203ENST00000614659 NSD2O96028 1365 aa17.83■□□□□ 0.44
SNPH-203ENST00000614659 GPATCH8Q9UKJ3 1502 aaKnown RBP17.83■□□□□ 0.44
SNPH-203ENST00000614659 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.44
SNPH-203ENST00000614659 CABP1Q9NZU7 370 aa17.83■□□□□ 0.44
SNPH-203ENST00000614659 SLC12A5Q9H2X9 1139 aa17.82■□□□□ 0.44
SNPH-203ENST00000614659 CABP4P57796 275 aa17.82■□□□□ 0.44
SNPH-203ENST00000614659 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
SNPH-203ENST00000614659 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
SNPH-203ENST00000614659 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
SNPH-203ENST00000614659 UBTFL1P0CB47 393 aaPredicted RBP17.81■□□□□ 0.44
SNPH-203ENST00000614659 FCHSD2O94868 740 aa17.81■□□□□ 0.44
SNPH-203ENST00000614659 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
SNPH-203ENST00000614659 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
SNPH-203ENST00000614659 GOLGA6L19H0YKK7 550 aa17.8■□□□□ 0.44
SNPH-203ENST00000614659 CADPS2Q86UW7 1296 aa17.8■□□□□ 0.44
SNPH-203ENST00000614659 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
SNPH-203ENST00000614659 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
SNPH-203ENST00000614659 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
SNPH-203ENST00000614659 TOM1O60784 492 aa17.8■□□□□ 0.44
SNPH-203ENST00000614659 BCAR3O75815 825 aa17.8■□□□□ 0.44
SNPH-203ENST00000614659 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
SNPH-203ENST00000614659 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
SNPH-203ENST00000614659 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
SNPH-203ENST00000614659 SMC3Q9UQE7 1217 aa17.79■□□□□ 0.44
SNPH-203ENST00000614659 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
SNPH-203ENST00000614659 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
SNPH-203ENST00000614659 HIP1O00291 1037 aa17.79■□□□□ 0.44
SNPH-203ENST00000614659 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
SNPH-203ENST00000614659 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
SNPH-203ENST00000614659 MARCH6O60337 910 aa17.78■□□□□ 0.44
SNPH-203ENST00000614659 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
SNPH-203ENST00000614659 LETM1O95202 739 aaPredicted RBP17.78■□□□□ 0.44
SNPH-203ENST00000614659 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
SNPH-203ENST00000614659 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
SNPH-203ENST00000614659 PSMA5P28066 241 aa17.77■□□□□ 0.44
SNPH-203ENST00000614659 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.44
SNPH-203ENST00000614659 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
SNPH-203ENST00000614659 CWC22Q9HCG8 908 aaKnown RBP17.77■□□□□ 0.44
SNPH-203ENST00000614659 MSH6P52701 1360 aa17.77■□□□□ 0.43
SNPH-203ENST00000614659 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
SNPH-203ENST00000614659 MBD3O95983 291 aa17.76■□□□□ 0.43
SNPH-203ENST00000614659 SHANK2Q9UPX8 1470 aa17.76■□□□□ 0.43
SNPH-203ENST00000614659 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
SNPH-203ENST00000614659 GNAI2P04899 355 aa17.76■□□□□ 0.43
SNPH-203ENST00000614659 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
SNPH-203ENST00000614659 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
SNPH-203ENST00000614659 BECN2A8MW95 431 aa17.75■□□□□ 0.43
SNPH-203ENST00000614659 PHF8Q9UPP1 1060 aa17.75■□□□□ 0.43
SNPH-203ENST00000614659 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
SNPH-203ENST00000614659 NOC3LQ8WTT2 800 aaKnown RBP17.74■□□□□ 0.43
SNPH-203ENST00000614659 TPM3P06753 285 aa17.74■□□□□ 0.43
SNPH-203ENST00000614659 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
SNPH-203ENST00000614659 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
SNPH-203ENST00000614659 MCTP1Q6DN14 999 aa17.73■□□□□ 0.43
SNPH-203ENST00000614659 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
SNPH-203ENST00000614659 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
SNPH-203ENST00000614659 KDM5BQ9UGL1 1544 aa17.73■□□□□ 0.43
SNPH-203ENST00000614659 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
SNPH-203ENST00000614659 TRAK2O60296 914 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 TRIM29Q14134 588 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
SNPH-203ENST00000614659 A2MP01023 1474 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 NUP153P49790 1475 aaKnown RBP17.72■□□□□ 0.43
SNPH-203ENST00000614659 TRDNQ13061 729 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
SNPH-203ENST00000614659 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
SNPH-203ENST00000614659 UHRF1BP1LA0JNW5 1464 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms