RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 PLEKHF1Q96S99 279 aa32.72■■■□□ 2.83
CDH24-206ENST00000610348 NRXN3Q9Y4C0 1643 aa32.71■■■□□ 2.83
CDH24-206ENST00000610348 HDGFP51858 240 aaKnown RBP32.71■■■□□ 2.83
CDH24-206ENST00000610348 MAPK8IP3Q9UPT6 1336 aa32.7■■■□□ 2.83
CDH24-206ENST00000610348 CLUAP1Q96AJ1 413 aa32.7■■■□□ 2.82
CDH24-206ENST00000610348 KNDC1Q76NI1 1749 aa32.69■■■□□ 2.82
CDH24-206ENST00000610348 U2SURPO15042 1029 aaKnown RBP32.69■■■□□ 2.82
CDH24-206ENST00000610348 CEBPAP49715 358 aaPredicted RBP32.69■■■□□ 2.82
CDH24-206ENST00000610348 CDC42BPGQ6DT37 1551 aa32.69■■■□□ 2.82
CDH24-206ENST00000610348 NPM2Q86SE8 214 aaKnown RBP32.68■■■□□ 2.82
CDH24-206ENST00000610348 DIAPH1O60610 1272 aaKnown RBP32.67■■■□□ 2.82
CDH24-206ENST00000610348 SIRT1Q96EB6 747 aa32.67■■■□□ 2.82
CDH24-206ENST00000610348 IL16Q14005 1332 aa32.67■■■□□ 2.82
CDH24-206ENST00000610348 ADAMTSL3P82987 1691 aa32.67■■■□□ 2.82
CDH24-206ENST00000610348 RIMS1Q86UR5 1692 aaKnown RBP32.67■■■□□ 2.82
CDH24-206ENST00000610348 FAM161AQ3B820 660 aa32.67■■■□□ 2.82
CDH24-206ENST00000610348 TMPOP42166 694 aaKnown RBP32.66■■■□□ 2.82
CDH24-206ENST00000610348 SKAP1Q86WV1 359 aa32.65■■■□□ 2.82
CDH24-206ENST00000610348 WAPLQ7Z5K2 1190 aa32.65■■■□□ 2.82
CDH24-206ENST00000610348 DDRGK1Q96HY6 314 aa32.65■■■□□ 2.82
CDH24-206ENST00000610348 FAM135BQ49AJ0 1406 aa32.64■■■□□ 2.82
CDH24-206ENST00000610348 PANK1Q8TE04 598 aa32.64■■■□□ 2.82
CDH24-206ENST00000610348 FRAT1Q92837 279 aaPredicted RBP32.64■■■□□ 2.82
CDH24-206ENST00000610348 COG6Q9Y2V7 657 aa32.63■■■□□ 2.81
CDH24-206ENST00000610348 TECPR2O15040 1411 aa32.62■■■□□ 2.81
CDH24-206ENST00000610348 EDC4Q6P2E9 1401 aaKnown RBP32.61■■■□□ 2.81
CDH24-206ENST00000610348 WASLO00401 505 aaPredicted RBP32.6■■■□□ 2.81
CDH24-206ENST00000610348 TNRQ92752 1358 aa32.6■■■□□ 2.81
CDH24-206ENST00000610348 CPSF1Q10570 1443 aaKnown RBP32.6■■■□□ 2.81
CDH24-206ENST00000610348 PMFBP1Q8TBY8 1022 aa32.6■■■□□ 2.81
CDH24-206ENST00000610348 PLPPR3Q6T4P5 718 aa32.59■■■□□ 2.81
CDH24-206ENST00000610348 FCHSD2O94868 740 aa32.58■■■□□ 2.81
CDH24-206ENST00000610348 CPS1P31327 1500 aa32.58■■■□□ 2.81
CDH24-206ENST00000610348 TRIM35Q9UPQ4 493 aa32.58■■■□□ 2.81
CDH24-206ENST00000610348 METP08581 1390 aa32.57■■■□□ 2.8
CDH24-206ENST00000610348 IGHDP01880 384 aa32.56■■■□□ 2.8
CDH24-206ENST00000610348 PPIP5K1Q6PFW1 1433 aa32.56■■■□□ 2.8
CDH24-206ENST00000610348 C8orf34Q49A92 452 aa32.55■■■□□ 2.8
CDH24-206ENST00000610348 ZKSCAN2Q63HK3 967 aa32.53■■■□□ 2.8
CDH24-206ENST00000610348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.53■■■□□ 2.8
CDH24-206ENST00000610348 UBR1Q8IWV7 1749 aa32.53■■■□□ 2.8
CDH24-206ENST00000610348 RGS3P49796 1198 aa32.52■■■□□ 2.8
CDH24-206ENST00000610348 POLKQ9UBT6 870 aa32.52■■■□□ 2.8
CDH24-206ENST00000610348 NEFMP07197 916 aa32.51■■■□□ 2.8
CDH24-206ENST00000610348 RIPK4P57078 832 aa32.51■■■□□ 2.8
CDH24-206ENST00000610348 MAP2P11137 1827 aaKnown RBP32.51■■■□□ 2.79
CDH24-206ENST00000610348 MON2Q7Z3U7 1717 aa32.51■■■□□ 2.79
CDH24-206ENST00000610348 LRRC7Q96NW7 1537 aa32.51■■■□□ 2.79
CDH24-206ENST00000610348 TMEM2Q9UHN6 1383 aa32.5■■■□□ 2.79
CDH24-206ENST00000610348 VIRMAQ69YN4 1812 aaKnown RBP32.5■■■□□ 2.79
CDH24-206ENST00000610348 AATKQ6ZMQ8 1374 aa32.5■■■□□ 2.79
CDH24-206ENST00000610348 RLBP1P12271 317 aa32.49■■■□□ 2.79
CDH24-206ENST00000610348 BCL2L13Q9BXK5 485 aa32.48■■■□□ 2.79
CDH24-206ENST00000610348 EXOSC9Q06265 439 aaKnown RBP32.48■■■□□ 2.79
CDH24-206ENST00000610348 TSR2Q969E8 191 aaKnown RBP32.48■■■□□ 2.79
CDH24-206ENST00000610348 CDK12Q9NYV4 1490 aaPredicted RBP32.48■■■□□ 2.79
CDH24-206ENST00000610348 MVPQ14764 893 aaKnown RBP32.47■■■□□ 2.79
CDH24-206ENST00000610348 TXNDC2Q86VQ3 553 aa32.47■■■□□ 2.79
CDH24-206ENST00000610348 CCDC61Q9Y6R9 512 aa32.47■■■□□ 2.79
CDH24-206ENST00000610348 AKAP12Q02952 1782 aa32.46■■■□□ 2.79
CDH24-206ENST00000610348 NUDT16Q96DE0 195 aaKnown RBP32.46■■■□□ 2.79
CDH24-206ENST00000610348 DZIP1LQ8IYY4 767 aaKnown RBP32.46■■■□□ 2.79
CDH24-206ENST00000610348 RSPH6AQ9H0K4 717 aa32.46■■■□□ 2.79
CDH24-206ENST00000610348 ITSN1Q15811 1721 aa32.46■■■□□ 2.79
CDH24-206ENST00000610348 FTSJ3Q8IY81 847 aaKnown RBP32.44■■■□□ 2.78
CDH24-206ENST00000610348 RWDD1Q9H446 243 aaPredicted RBP32.44■■■□□ 2.78
CDH24-206ENST00000610348 SMC4Q9NTJ3 1288 aa32.44■■■□□ 2.78
CDH24-206ENST00000610348 ZNF692Q9BU19 519 aaPredicted RBP32.43■■■□□ 2.78
CDH24-206ENST00000610348 CALD1Q05682 793 aaKnown RBP32.41■■■□□ 2.78
CDH24-206ENST00000610348 PCDHB15Q9Y5E8 787 aa32.41■■■□□ 2.78
CDH24-206ENST00000610348 PRKAR2BP31323 418 aa32.4■■■□□ 2.78
CDH24-206ENST00000610348 ZNF428Q96B54 188 aa32.4■■■□□ 2.78
CDH24-206ENST00000610348 TNNQ9UQP3 1299 aa32.4■■■□□ 2.78
CDH24-206ENST00000610348 PPM1GO15355 546 aaPredicted RBP32.39■■■□□ 2.78
CDH24-206ENST00000610348 NBR1Q14596 966 aa32.39■■■□□ 2.78
CDH24-206ENST00000610348 COG3Q96JB2 828 aa32.39■■■□□ 2.78
CDH24-206ENST00000610348 PLEKHG1Q9ULL1 1385 aa32.38■■■□□ 2.77
CDH24-206ENST00000610348 KIF16BQ96L93 1317 aa32.38■■■□□ 2.77
CDH24-206ENST00000610348 ALDH1L2Q3SY69 923 aa32.38■■■□□ 2.77
CDH24-206ENST00000610348 SSH1Q8WYL5 1049 aa32.38■■■□□ 2.77
CDH24-206ENST00000610348 ADAMTS13Q76LX8 1427 aa32.37■■■□□ 2.77
CDH24-206ENST00000610348 NFE2L2Q16236 605 aa32.37■■■□□ 2.77
CDH24-206ENST00000610348 RTL5Q5HYW3 569 aaPredicted RBP32.37■■■□□ 2.77
CDH24-206ENST00000610348 NME9Q86XW9 330 aa32.37■■■□□ 2.77
CDH24-206ENST00000610348 ATF7IPQ6VMQ6 1270 aa32.36■■■□□ 2.77
CDH24-206ENST00000610348 SETD1BQ9UPS6 1966 aaKnown RBP32.36■■■□□ 2.77
CDH24-206ENST00000610348 IPO8O15397 1037 aaKnown RBP32.36■■■□□ 2.77
CDH24-206ENST00000610348 IL13P35225 146 aa32.36■■■□□ 2.77
CDH24-206ENST00000610348 DDX19BQ9UMR2 479 aa32.36■■■□□ 2.77
CDH24-206ENST00000610348 TRIM27P14373 513 aa32.33■■■□□ 2.77
CDH24-206ENST00000610348 DAXXQ9UER7 740 aaPredicted RBP32.33■■■□□ 2.77
CDH24-206ENST00000610348 EMILIN1Q9Y6C2 1016 aa32.33■■■□□ 2.77
CDH24-206ENST00000610348 ROBO2Q9HCK4 1378 aa32.32■■■□□ 2.76
CDH24-206ENST00000610348 BRPF1P55201 1214 aaPredicted RBP32.31■■■□□ 2.76
CDH24-206ENST00000610348 TOPAZ1Q8N9V7 1692 aa32.31■■■□□ 2.76
CDH24-206ENST00000610348 USP35Q9P2H5 1018 aa32.31■■■□□ 2.76
CDH24-206ENST00000610348 LMOD3Q0VAK6 560 aa32.3■■■□□ 2.76
CDH24-206ENST00000610348 FBLN1P23142 703 aa32.29■■■□□ 2.76
CDH24-206ENST00000610348 NOB1Q9ULX3 412 aaKnown RBP32.28■■■□□ 2.76
CDH24-206ENST00000610348 PDZRN3Q9UPQ7 1066 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms