RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
LINC02538-201ENST00000609107 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
LINC02538-201ENST00000609107 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
LINC02538-201ENST00000609107 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
LINC02538-201ENST00000609107 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
LINC02538-201ENST00000609107 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
LINC02538-201ENST00000609107 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
LINC02538-201ENST00000609107 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
LINC02538-201ENST00000609107 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
LINC02538-201ENST00000609107 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
LINC02538-201ENST00000609107 KDM6BO15054 1643 aa17.48■□□□□ 0.39
LINC02538-201ENST00000609107 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
LINC02538-201ENST00000609107 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
LINC02538-201ENST00000609107 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
LINC02538-201ENST00000609107 ARHGEF5Q12774 1597 aa17.48■□□□□ 0.39
LINC02538-201ENST00000609107 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
LINC02538-201ENST00000609107 ZNF518AQ6AHZ1 1483 aa17.47■□□□□ 0.39
LINC02538-201ENST00000609107 INSRP06213 1382 aa17.47■□□□□ 0.39
LINC02538-201ENST00000609107 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
LINC02538-201ENST00000609107 RABEP1Q15276 862 aa17.47■□□□□ 0.39
LINC02538-201ENST00000609107 PUS7Q96PZ0 661 aaKnown RBP17.47■□□□□ 0.39
LINC02538-201ENST00000609107 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
LINC02538-201ENST00000609107 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
LINC02538-201ENST00000609107 MAST1Q9Y2H9 1570 aa17.46■□□□□ 0.39
LINC02538-201ENST00000609107 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
LINC02538-201ENST00000609107 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
LINC02538-201ENST00000609107 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
LINC02538-201ENST00000609107 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
LINC02538-201ENST00000609107 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
LINC02538-201ENST00000609107 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.38
LINC02538-201ENST00000609107 TRAK2O60296 914 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
LINC02538-201ENST00000609107 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
LINC02538-201ENST00000609107 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 RRS1Q15050 365 aaKnown RBP17.45■□□□□ 0.38
LINC02538-201ENST00000609107 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 IL16Q14005 1332 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
LINC02538-201ENST00000609107 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
LINC02538-201ENST00000609107 GNAI2P04899 355 aa17.44■□□□□ 0.38
LINC02538-201ENST00000609107 MRE11P49959 708 aa17.44■□□□□ 0.38
LINC02538-201ENST00000609107 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
LINC02538-201ENST00000609107 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 ERC2O15083 957 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
LINC02538-201ENST00000609107 ABTB2Q8N961 1025 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 PLEKHH1Q9ULM0 1364 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 RPAP2Q8IXW5 612 aaPredicted RBP17.43■□□□□ 0.38
LINC02538-201ENST00000609107 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
LINC02538-201ENST00000609107 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC02538-201ENST00000609107 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
LINC02538-201ENST00000609107 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
LINC02538-201ENST00000609107 MBD5Q9P267 1494 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 TRIM27P14373 513 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 IGHDP01880 384 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 MCM2P49736 904 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 ABCA8O94911 1581 aa17.41■□□□□ 0.38
LINC02538-201ENST00000609107 WASLO00401 505 aaPredicted RBP17.4■□□□□ 0.38
LINC02538-201ENST00000609107 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
LINC02538-201ENST00000609107 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
LINC02538-201ENST00000609107 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
LINC02538-201ENST00000609107 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
LINC02538-201ENST00000609107 NME9Q86XW9 330 aa17.39■□□□□ 0.37
LINC02538-201ENST00000609107 K7ELQ4 463 aaPredicted RBP17.38■□□□□ 0.37
LINC02538-201ENST00000609107 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
LINC02538-201ENST00000609107 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
LINC02538-201ENST00000609107 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
LINC02538-201ENST00000609107 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
LINC02538-201ENST00000609107 SLC26A8Q96RN1 970 aa17.38■□□□□ 0.37
LINC02538-201ENST00000609107 NPHP1O15259 732 aa17.37■□□□□ 0.37
LINC02538-201ENST00000609107 EMILIN1Q9Y6C2 1016 aa17.37■□□□□ 0.37
LINC02538-201ENST00000609107 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
LINC02538-201ENST00000609107 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
LINC02538-201ENST00000609107 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
LINC02538-201ENST00000609107 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
LINC02538-201ENST00000609107 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
LINC02538-201ENST00000609107 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
LINC02538-201ENST00000609107 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
LINC02538-201ENST00000609107 MCM4P33991 863 aa17.36■□□□□ 0.37
LINC02538-201ENST00000609107 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
LINC02538-201ENST00000609107 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 SMC3Q9UQE7 1217 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 KDM5CP41229 1560 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 FYB1O15117 783 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 NEK4P51957 841 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
LINC02538-201ENST00000609107 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms