RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
SMG9-211ENST00000601170 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
SMG9-211ENST00000601170 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.55
SMG9-211ENST00000601170 SEC24BO95487 1268 aa18.51■□□□□ 0.55
SMG9-211ENST00000601170 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
SMG9-211ENST00000601170 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
SMG9-211ENST00000601170 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
SMG9-211ENST00000601170 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
SMG9-211ENST00000601170 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
SMG9-211ENST00000601170 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
SMG9-211ENST00000601170 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
SMG9-211ENST00000601170 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
SMG9-211ENST00000601170 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
SMG9-211ENST00000601170 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
SMG9-211ENST00000601170 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
SMG9-211ENST00000601170 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
SMG9-211ENST00000601170 ARHGEF40Q8TER5 1519 aa18.48■□□□□ 0.55
SMG9-211ENST00000601170 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
SMG9-211ENST00000601170 SMC4Q9NTJ3 1288 aa18.48■□□□□ 0.55
SMG9-211ENST00000601170 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
SMG9-211ENST00000601170 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
SMG9-211ENST00000601170 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
SMG9-211ENST00000601170 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
SMG9-211ENST00000601170 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
SMG9-211ENST00000601170 IL16Q14005 1332 aa18.45■□□□□ 0.54
SMG9-211ENST00000601170 RIPK4P57078 832 aa18.45■□□□□ 0.54
SMG9-211ENST00000601170 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
SMG9-211ENST00000601170 TRIM27P14373 513 aa18.44■□□□□ 0.54
SMG9-211ENST00000601170 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
SMG9-211ENST00000601170 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
SMG9-211ENST00000601170 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
SMG9-211ENST00000601170 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
SMG9-211ENST00000601170 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
SMG9-211ENST00000601170 GSE1Q14687 1217 aa18.41■□□□□ 0.54
SMG9-211ENST00000601170 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
SMG9-211ENST00000601170 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
SMG9-211ENST00000601170 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
SMG9-211ENST00000601170 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
SMG9-211ENST00000601170 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
SMG9-211ENST00000601170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMG9-211ENST00000601170 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
SMG9-211ENST00000601170 A2ML1A8K2U0 1454 aa18.39■□□□□ 0.54
SMG9-211ENST00000601170 ATP7BP35670 1465 aa18.39■□□□□ 0.54
SMG9-211ENST00000601170 BECN1Q14457 450 aa18.39■□□□□ 0.53
SMG9-211ENST00000601170 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
SMG9-211ENST00000601170 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
SMG9-211ENST00000601170 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
SMG9-211ENST00000601170 TSPOAP1O95153 1857 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 FBLN1P23142 703 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 FAM69CQ0P6D2 419 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
SMG9-211ENST00000601170 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 AGLP35573 1532 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
SMG9-211ENST00000601170 POLKQ9UBT6 870 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
SMG9-211ENST00000601170 DIP2BQ9P265 1576 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
SMG9-211ENST00000601170 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
SMG9-211ENST00000601170 TMEM57Q8N5G2 664 aa18.36■□□□□ 0.53
SMG9-211ENST00000601170 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
SMG9-211ENST00000601170 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.53
SMG9-211ENST00000601170 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.53
SMG9-211ENST00000601170 ZBTB40Q9NUA8 1239 aa18.33■□□□□ 0.52
SMG9-211ENST00000601170 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
SMG9-211ENST00000601170 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
SMG9-211ENST00000601170 HMOX1P09601 288 aa18.32■□□□□ 0.52
SMG9-211ENST00000601170 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
SMG9-211ENST00000601170 SLKQ9H2G2 1235 aaPredicted RBP18.32■□□□□ 0.52
SMG9-211ENST00000601170 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
SMG9-211ENST00000601170 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
SMG9-211ENST00000601170 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
SMG9-211ENST00000601170 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
SMG9-211ENST00000601170 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
SMG9-211ENST00000601170 MLECQ14165 292 aa18.3■□□□□ 0.52
SMG9-211ENST00000601170 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
SMG9-211ENST00000601170 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
SMG9-211ENST00000601170 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
SMG9-211ENST00000601170 NME9Q86XW9 330 aa18.28■□□□□ 0.52
SMG9-211ENST00000601170 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
SMG9-211ENST00000601170 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
SMG9-211ENST00000601170 ZNF428Q96B54 188 aa18.28■□□□□ 0.52
SMG9-211ENST00000601170 METP08581 1390 aa18.27■□□□□ 0.52
SMG9-211ENST00000601170 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
SMG9-211ENST00000601170 IL13P35225 146 aa18.27■□□□□ 0.52
SMG9-211ENST00000601170 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.52
SMG9-211ENST00000601170 MFAP1P55081 439 aaKnown RBP18.26■□□□□ 0.51
SMG9-211ENST00000601170 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
SMG9-211ENST00000601170 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
SMG9-211ENST00000601170 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
SMG9-211ENST00000601170 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
SMG9-211ENST00000601170 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
SMG9-211ENST00000601170 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
SMG9-211ENST00000601170 VAMP4O75379 141 aa18.25■□□□□ 0.51
SMG9-211ENST00000601170 KNDC1Q76NI1 1749 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 AATKQ6ZMQ8 1374 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms