RNA–Protein interactions for RNA: ENST00000599019.5

PRKD2-212, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-212ENST00000599019 MYH16Q9H6N6 1097 aa27.57■■■□□ 2
PRKD2-212ENST00000599019 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
PRKD2-212ENST00000599019 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
PRKD2-212ENST00000599019 NRXN3Q9Y4C0 1643 aa27.56■■■□□ 2
PRKD2-212ENST00000599019 FAM135BQ49AJ0 1406 aa27.56■■■□□ 2
PRKD2-212ENST00000599019 ANKLE2Q86XL3 938 aa27.55■■■□□ 2
PRKD2-212ENST00000599019 CT47B1P0C2W7 299 aaPredicted RBP27.55■■■□□ 2
PRKD2-212ENST00000599019 PDE4AP27815 886 aa27.55■■■□□ 2
PRKD2-212ENST00000599019 TECPR2O15040 1411 aa27.54■■■□□ 2
PRKD2-212ENST00000599019 BACH2Q9BYV9 841 aa27.54■■■□□ 2
PRKD2-212ENST00000599019 PNPLA6Q8IY17 1366 aa27.54■■■□□ 2
PRKD2-212ENST00000599019 IPO9Q96P70 1041 aaKnown RBP27.53■■■□□ 2
PRKD2-212ENST00000599019 GGNBP2Q9H3C7 697 aa27.53■■■□□ 2
PRKD2-212ENST00000599019 BCAR3O75815 825 aa27.51■■□□□ 1.99
PRKD2-212ENST00000599019 NOP58Q9Y2X3 529 aaKnown RBP27.51■■□□□ 1.99
PRKD2-212ENST00000599019 CDC42BPGQ6DT37 1551 aa27.51■■□□□ 1.99
PRKD2-212ENST00000599019 CABP1Q9NZU7 370 aa27.5■■□□□ 1.99
PRKD2-212ENST00000599019 CPS1P31327 1500 aa27.48■■□□□ 1.99
PRKD2-212ENST00000599019 IL16Q14005 1332 aa27.48■■□□□ 1.99
PRKD2-212ENST00000599019 NEUROD2Q15784 382 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 RRP7AQ9Y3A4 280 aaKnown RBP27.47■■□□□ 1.99
PRKD2-212ENST00000599019 SLIT1O75093 1534 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 MAPK8IP3Q9UPT6 1336 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 CANXP27824 592 aaKnown RBP27.47■■□□□ 1.99
PRKD2-212ENST00000599019 RARSP54136 660 aaKnown RBP27.47■■□□□ 1.99
PRKD2-212ENST00000599019 CERKQ8TCT0 537 aa27.47■■□□□ 1.99
PRKD2-212ENST00000599019 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
PRKD2-212ENST00000599019 DIAPH1O60610 1272 aaKnown RBP27.46■■□□□ 1.99
PRKD2-212ENST00000599019 CPSF1Q10570 1443 aaKnown RBP27.45■■□□□ 1.99
PRKD2-212ENST00000599019 WASLO00401 505 aaPredicted RBP27.45■■□□□ 1.99
PRKD2-212ENST00000599019 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
PRKD2-212ENST00000599019 WAPLQ7Z5K2 1190 aa27.43■■□□□ 1.98
PRKD2-212ENST00000599019 ILDR1Q86SU0 546 aaPredicted RBP27.43■■□□□ 1.98
PRKD2-212ENST00000599019 TMEM2Q9UHN6 1383 aa27.43■■□□□ 1.98
PRKD2-212ENST00000599019 NPHP4O75161 1426 aaPredicted RBP27.43■■□□□ 1.98
PRKD2-212ENST00000599019 U2SURPO15042 1029 aaKnown RBP27.42■■□□□ 1.98
PRKD2-212ENST00000599019 LTKP29376 864 aa27.42■■□□□ 1.98
PRKD2-212ENST00000599019 METP08581 1390 aa27.42■■□□□ 1.98
PRKD2-212ENST00000599019 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
PRKD2-212ENST00000599019 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
PRKD2-212ENST00000599019 ZNF335Q9H4Z2 1342 aaPredicted RBP27.41■■□□□ 1.98
PRKD2-212ENST00000599019 TXNDC2Q86VQ3 553 aa27.41■■□□□ 1.98
PRKD2-212ENST00000599019 FCHSD2O94868 740 aa27.4■■□□□ 1.98
PRKD2-212ENST00000599019 ZBTB47Q9UFB7 747 aaPredicted RBP27.4■■□□□ 1.98
PRKD2-212ENST00000599019 PPIP5K1Q6PFW1 1433 aa27.39■■□□□ 1.98
PRKD2-212ENST00000599019 CLUAP1Q96AJ1 413 aa27.39■■□□□ 1.98
PRKD2-212ENST00000599019 AATKQ6ZMQ8 1374 aa27.38■■□□□ 1.97
PRKD2-212ENST00000599019 FBXO41Q8TF61 875 aa27.38■■□□□ 1.97
PRKD2-212ENST00000599019 EID1Q9Y6B2 187 aa27.38■■□□□ 1.97
PRKD2-212ENST00000599019 NEFMP07197 916 aa27.36■■□□□ 1.97
PRKD2-212ENST00000599019 MON2Q7Z3U7 1717 aa27.35■■□□□ 1.97
PRKD2-212ENST00000599019 CCDC61Q9Y6R9 512 aa27.35■■□□□ 1.97
PRKD2-212ENST00000599019 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
PRKD2-212ENST00000599019 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
PRKD2-212ENST00000599019 ZNF692Q9BU19 519 aaPredicted RBP27.34■■□□□ 1.97
PRKD2-212ENST00000599019 CDK12Q9NYV4 1490 aaPredicted RBP27.34■■□□□ 1.97
PRKD2-212ENST00000599019 FAM161AQ3B820 660 aa27.33■■□□□ 1.97
PRKD2-212ENST00000599019 TRIM35Q9UPQ4 493 aa27.33■■□□□ 1.97
PRKD2-212ENST00000599019 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
PRKD2-212ENST00000599019 DDRGK1Q96HY6 314 aa27.32■■□□□ 1.96
PRKD2-212ENST00000599019 POLKQ9UBT6 870 aa27.32■■□□□ 1.96
PRKD2-212ENST00000599019 FRAT1Q92837 279 aaPredicted RBP27.31■■□□□ 1.96
PRKD2-212ENST00000599019 AKAP12Q02952 1782 aa27.31■■□□□ 1.96
PRKD2-212ENST00000599019 COG6Q9Y2V7 657 aa27.3■■□□□ 1.96
PRKD2-212ENST00000599019 ADAMTS13Q76LX8 1427 aa27.3■■□□□ 1.96
PRKD2-212ENST00000599019 ITSN1Q15811 1721 aa27.3■■□□□ 1.96
PRKD2-212ENST00000599019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.3■■□□□ 1.96
PRKD2-212ENST00000599019 PANK1Q8TE04 598 aa27.3■■□□□ 1.96
PRKD2-212ENST00000599019 LRRC7Q96NW7 1537 aa27.29■■□□□ 1.96
PRKD2-212ENST00000599019 ZKSCAN2Q63HK3 967 aa27.29■■□□□ 1.96
PRKD2-212ENST00000599019 RIPK4P57078 832 aa27.28■■□□□ 1.96
PRKD2-212ENST00000599019 CALD1Q05682 793 aaKnown RBP27.28■■□□□ 1.96
PRKD2-212ENST00000599019 ZNF428Q96B54 188 aa27.27■■□□□ 1.96
PRKD2-212ENST00000599019 RSPH6AQ9H0K4 717 aa27.26■■□□□ 1.95
PRKD2-212ENST00000599019 COG3Q96JB2 828 aa27.25■■□□□ 1.95
PRKD2-212ENST00000599019 MAP2P11137 1827 aaKnown RBP27.25■■□□□ 1.95
PRKD2-212ENST00000599019 PAK3O75914 559 aaPredicted RBP27.22■■□□□ 1.95
PRKD2-212ENST00000599019 IGHDP01880 384 aa27.22■■□□□ 1.95
PRKD2-212ENST00000599019 EXOSC9Q06265 439 aaKnown RBP27.22■■□□□ 1.95
PRKD2-212ENST00000599019 MVPQ14764 893 aaKnown RBP27.22■■□□□ 1.95
PRKD2-212ENST00000599019 NPM2Q86SE8 214 aaKnown RBP27.22■■□□□ 1.95
PRKD2-212ENST00000599019 DZIP1LQ8IYY4 767 aaKnown RBP27.21■■□□□ 1.95
PRKD2-212ENST00000599019 TOPAZ1Q8N9V7 1692 aa27.21■■□□□ 1.95
PRKD2-212ENST00000599019 ROBO2Q9HCK4 1378 aa27.21■■□□□ 1.95
PRKD2-212ENST00000599019 ALDH1L2Q3SY69 923 aa27.21■■□□□ 1.95
PRKD2-212ENST00000599019 PRKAR2BP31323 418 aa27.2■■□□□ 1.94
PRKD2-212ENST00000599019 NFE2L2Q16236 605 aa27.2■■□□□ 1.94
PRKD2-212ENST00000599019 C8orf34Q49A92 452 aa27.2■■□□□ 1.94
PRKD2-212ENST00000599019 RWDD1Q9H446 243 aaPredicted RBP27.2■■□□□ 1.94
PRKD2-212ENST00000599019 KIF16BQ96L93 1317 aa27.2■■□□□ 1.94
PRKD2-212ENST00000599019 STRCP1A6NGW2 1772 aa27.19■■□□□ 1.94
PRKD2-212ENST00000599019 IL13P35225 146 aa27.19■■□□□ 1.94
PRKD2-212ENST00000599019 NME9Q86XW9 330 aa27.19■■□□□ 1.94
PRKD2-212ENST00000599019 TSR2Q969E8 191 aaKnown RBP27.19■■□□□ 1.94
PRKD2-212ENST00000599019 SMC4Q9NTJ3 1288 aa27.19■■□□□ 1.94
PRKD2-212ENST00000599019 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
PRKD2-212ENST00000599019 IPO8O15397 1037 aaKnown RBP27.19■■□□□ 1.94
PRKD2-212ENST00000599019 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms