RNA–Protein interactions for RNA: ENST00000588874.5

BCAS3-221, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene BCAS3, Length 2,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-221ENST00000588874 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
BCAS3-221ENST00000588874 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
BCAS3-221ENST00000588874 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
BCAS3-221ENST00000588874 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
BCAS3-221ENST00000588874 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
BCAS3-221ENST00000588874 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
BCAS3-221ENST00000588874 TRIM27P14373 513 aa17.35■□□□□ 0.37
BCAS3-221ENST00000588874 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
BCAS3-221ENST00000588874 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
BCAS3-221ENST00000588874 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
BCAS3-221ENST00000588874 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
BCAS3-221ENST00000588874 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
BCAS3-221ENST00000588874 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
BCAS3-221ENST00000588874 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
BCAS3-221ENST00000588874 DZIP1LQ8IYY4 767 aaKnown RBP17.34■□□□□ 0.37
BCAS3-221ENST00000588874 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
BCAS3-221ENST00000588874 ABCC11Q96J66 1382 aa17.33■□□□□ 0.37
BCAS3-221ENST00000588874 NUTM2FA1L443 756 aa17.33■□□□□ 0.37
BCAS3-221ENST00000588874 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
BCAS3-221ENST00000588874 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.36
BCAS3-221ENST00000588874 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
BCAS3-221ENST00000588874 TXNDC2Q86VQ3 553 aa17.32■□□□□ 0.36
BCAS3-221ENST00000588874 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
BCAS3-221ENST00000588874 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
BCAS3-221ENST00000588874 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
BCAS3-221ENST00000588874 NEO1Q92859 1461 aa17.31■□□□□ 0.36
BCAS3-221ENST00000588874 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
BCAS3-221ENST00000588874 PTPRMP28827 1452 aa17.3■□□□□ 0.36
BCAS3-221ENST00000588874 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
BCAS3-221ENST00000588874 CD163L1Q9NR16 1453 aa17.3■□□□□ 0.36
BCAS3-221ENST00000588874 NME9Q86XW9 330 aa17.3■□□□□ 0.36
BCAS3-221ENST00000588874 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
BCAS3-221ENST00000588874 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
BCAS3-221ENST00000588874 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
BCAS3-221ENST00000588874 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
BCAS3-221ENST00000588874 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
BCAS3-221ENST00000588874 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
BCAS3-221ENST00000588874 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
BCAS3-221ENST00000588874 TSPYL6Q8N831 410 aa17.27■□□□□ 0.35
BCAS3-221ENST00000588874 NSD2O96028 1365 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 SOX12O15370 315 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
BCAS3-221ENST00000588874 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
BCAS3-221ENST00000588874 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
BCAS3-221ENST00000588874 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
BCAS3-221ENST00000588874 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
BCAS3-221ENST00000588874 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
BCAS3-221ENST00000588874 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
BCAS3-221ENST00000588874 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
BCAS3-221ENST00000588874 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
BCAS3-221ENST00000588874 COL3A1P02461 1466 aaPredicted RBP17.22■□□□□ 0.35
BCAS3-221ENST00000588874 ALKQ9UM73 1620 aa17.22■□□□□ 0.35
BCAS3-221ENST00000588874 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
BCAS3-221ENST00000588874 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
BCAS3-221ENST00000588874 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
BCAS3-221ENST00000588874 METP08581 1390 aa17.21■□□□□ 0.35
BCAS3-221ENST00000588874 USP32Q8NFA0 1604 aa17.2■□□□□ 0.34
BCAS3-221ENST00000588874 FCHSD2O94868 740 aa17.2■□□□□ 0.34
BCAS3-221ENST00000588874 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
BCAS3-221ENST00000588874 GLIPR1L2Q4G1C9 344 aa17.19■□□□□ 0.34
BCAS3-221ENST00000588874 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
BCAS3-221ENST00000588874 ZBTB40Q9NUA8 1239 aa17.18■□□□□ 0.34
BCAS3-221ENST00000588874 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
BCAS3-221ENST00000588874 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
BCAS3-221ENST00000588874 WASLO00401 505 aaPredicted RBP17.17■□□□□ 0.34
BCAS3-221ENST00000588874 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
BCAS3-221ENST00000588874 ARXQ96QS3 562 aa17.17■□□□□ 0.34
BCAS3-221ENST00000588874 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
BCAS3-221ENST00000588874 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
BCAS3-221ENST00000588874 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
BCAS3-221ENST00000588874 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
BCAS3-221ENST00000588874 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
BCAS3-221ENST00000588874 ADGRB2O60241 1585 aa17.16■□□□□ 0.34
BCAS3-221ENST00000588874 PNPLA6Q8IY17 1366 aa17.16■□□□□ 0.34
BCAS3-221ENST00000588874 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
BCAS3-221ENST00000588874 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
BCAS3-221ENST00000588874 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
BCAS3-221ENST00000588874 VAMP4O75379 141 aa17.15■□□□□ 0.34
BCAS3-221ENST00000588874 IL13P35225 146 aa17.15■□□□□ 0.34
BCAS3-221ENST00000588874 DNAJC5Q9H3Z4 198 aa17.15■□□□□ 0.34
BCAS3-221ENST00000588874 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.34
BCAS3-221ENST00000588874 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
BCAS3-221ENST00000588874 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
BCAS3-221ENST00000588874 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
BCAS3-221ENST00000588874 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
BCAS3-221ENST00000588874 BECN1Q14457 450 aa17.13■□□□□ 0.33
BCAS3-221ENST00000588874 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
BCAS3-221ENST00000588874 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
BCAS3-221ENST00000588874 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
BCAS3-221ENST00000588874 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
BCAS3-221ENST00000588874 COG3Q96JB2 828 aa17.12■□□□□ 0.33
BCAS3-221ENST00000588874 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
BCAS3-221ENST00000588874 IL16Q14005 1332 aa17.11■□□□□ 0.33
BCAS3-221ENST00000588874 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
BCAS3-221ENST00000588874 SLC26A8Q96RN1 970 aa17.11■□□□□ 0.33
BCAS3-221ENST00000588874 AAMPQ13685 434 aa17.11■□□□□ 0.33
BCAS3-221ENST00000588874 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms