RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
CACNA1A-209ENST00000587525 PHACTR3Q96KR7 559 aa17■□□□□ 0.31
CACNA1A-209ENST00000587525 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
CACNA1A-209ENST00000587525 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
CACNA1A-209ENST00000587525 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 ASXL2Q76L83 1435 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 FYB1O15117 783 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
CACNA1A-209ENST00000587525 DDX54Q8TDD1 881 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-209ENST00000587525 EXOC6BQ9Y2D4 811 aa16.98■□□□□ 0.31
CACNA1A-209ENST00000587525 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-209ENST00000587525 GNAI1P63096 354 aa16.97■□□□□ 0.31
CACNA1A-209ENST00000587525 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-209ENST00000587525 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
CACNA1A-209ENST00000587525 ZMYND15Q9H091 742 aa16.96■□□□□ 0.31
CACNA1A-209ENST00000587525 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-209ENST00000587525 COL17A1Q9UMD9 1497 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-209ENST00000587525 ITSN2Q9NZM3 1697 aa16.96■□□□□ 0.3
CACNA1A-209ENST00000587525 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.3
CACNA1A-209ENST00000587525 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
CACNA1A-209ENST00000587525 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
CACNA1A-209ENST00000587525 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-209ENST00000587525 FGD1P98174 961 aa16.95■□□□□ 0.3
CACNA1A-209ENST00000587525 XRCC6P12956 609 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 CD109Q6YHK3 1445 aa16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 PLCH2O75038 1416 aa16.94■□□□□ 0.3
CACNA1A-209ENST00000587525 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 NEK4P51957 841 aa16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 STAC3Q96MF2 364 aa16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
CACNA1A-209ENST00000587525 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 SSFA2P28290 1259 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 CEBPAP49715 358 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 NLRP6P59044 892 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 FANCAO15360 1455 aa16.92■□□□□ 0.3
CACNA1A-209ENST00000587525 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-209ENST00000587525 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-209ENST00000587525 KDM5CP41229 1560 aa16.91■□□□□ 0.3
CACNA1A-209ENST00000587525 ST18O60284 1047 aa16.91■□□□□ 0.3
CACNA1A-209ENST00000587525 FOSBP53539 338 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 HMMRO75330 724 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 ESPNB1AK53 854 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
CACNA1A-209ENST00000587525 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.3
CACNA1A-209ENST00000587525 MBIPQ9NS73 344 aa16.89■□□□□ 0.3
CACNA1A-209ENST00000587525 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 OTUD7AQ8TE49 926 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 GRPEL1Q9HAV7 217 aa16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 CDC45O75419 566 aa16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-209ENST00000587525 ANXA1P04083 346 aa16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 MCCP23508 829 aa16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 MRE11P49959 708 aa16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
CACNA1A-209ENST00000587525 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
CACNA1A-209ENST00000587525 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
CACNA1A-209ENST00000587525 FOXO3O43524 673 aa16.87■□□□□ 0.29
CACNA1A-209ENST00000587525 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
CACNA1A-209ENST00000587525 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
CACNA1A-209ENST00000587525 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-209ENST00000587525 FCHSD2O94868 740 aa16.85■□□□□ 0.29
CACNA1A-209ENST00000587525 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-209ENST00000587525 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
CACNA1A-209ENST00000587525 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-209ENST00000587525 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 TTC37Q6PGP7 1564 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 MEIS3Q99687 375 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
CACNA1A-209ENST00000587525 GOLGA6L4A6NEF3 574 aa16.83■□□□□ 0.29
CACNA1A-209ENST00000587525 FBXW7Q969H0 707 aa16.83■□□□□ 0.29
CACNA1A-209ENST00000587525 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.29
CACNA1A-209ENST00000587525 INTS3Q68E01 1043 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-209ENST00000587525 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
CACNA1A-209ENST00000587525 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-209ENST00000587525 K7ELQ4 463 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-209ENST00000587525 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
CACNA1A-209ENST00000587525 ZNF521Q96K83 1311 aa16.82■□□□□ 0.28
CACNA1A-209ENST00000587525 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms