RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 RLBP1P12271 317 aa16.47■□□□□ 0.23
TRAPPC8-207ENST00000580104 TEFQ10587 303 aa16.47■□□□□ 0.23
TRAPPC8-207ENST00000580104 SYCE3A1L190 88 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 ZNF771Q7L3S4 317 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 ERC2O15083 957 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 CDK19Q9BWU1 502 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 TPM4P67936 248 aa16.46■□□□□ 0.23
TRAPPC8-207ENST00000580104 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.22
TRAPPC8-207ENST00000580104 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 DCTN1Q14203 1278 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 SPC24Q8NBT2 197 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 UQCRHP07919 91 aa16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-207ENST00000580104 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
TRAPPC8-207ENST00000580104 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
TRAPPC8-207ENST00000580104 ZNF428Q96B54 188 aa16.44■□□□□ 0.22
TRAPPC8-207ENST00000580104 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC8-207ENST00000580104 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
TRAPPC8-207ENST00000580104 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 SASS6Q6UVJ0 657 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 FCHSD2O94868 740 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 GNAI2P04899 355 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
TRAPPC8-207ENST00000580104 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 GNAI3P08754 354 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 MCM2P49736 904 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
TRAPPC8-207ENST00000580104 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 FBLN1P23142 703 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 TNNT3P45378 269 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.21
TRAPPC8-207ENST00000580104 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC8-207ENST00000580104 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
TRAPPC8-207ENST00000580104 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
TRAPPC8-207ENST00000580104 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
TRAPPC8-207ENST00000580104 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
TRAPPC8-207ENST00000580104 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
TRAPPC8-207ENST00000580104 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
TRAPPC8-207ENST00000580104 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
TRAPPC8-207ENST00000580104 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
TRAPPC8-207ENST00000580104 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
TRAPPC8-207ENST00000580104 PZPP20742 1482 aa16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 MTERF4Q7Z6M4 381 aaKnown RBP16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 GDPD2Q9HCC8 539 aa16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 MCM10Q7L590 875 aa16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
TRAPPC8-207ENST00000580104 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 CLCN1P35523 988 aa16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
TRAPPC8-207ENST00000580104 NPHP1O15259 732 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 NLRP6P59044 892 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 EMILIN1Q9Y6C2 1016 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 KIF14Q15058 1648 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
TRAPPC8-207ENST00000580104 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.21
TRAPPC8-207ENST00000580104 RAPGEF3O95398 923 aa16.33■□□□□ 0.21
TRAPPC8-207ENST00000580104 HMGN5P82970 282 aaKnown RBP16.33■□□□□ 0.21
TRAPPC8-207ENST00000580104 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.21
TRAPPC8-207ENST00000580104 STK3Q13188 491 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms