RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
RNF43-203ENST00000577716 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
RNF43-203ENST00000577716 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
RNF43-203ENST00000577716 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
RNF43-203ENST00000577716 MCM2P49736 904 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
RNF43-203ENST00000577716 ZNF592Q92610 1267 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
RNF43-203ENST00000577716 FCHSD2O94868 740 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 CCDC30Q5VVM6 783 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
RNF43-203ENST00000577716 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
RNF43-203ENST00000577716 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
RNF43-203ENST00000577716 GNAI2P04899 355 aa13.18□□□□□ -0.3
RNF43-203ENST00000577716 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
RNF43-203ENST00000577716 PSME1Q06323 249 aa13.18□□□□□ -0.3
RNF43-203ENST00000577716 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
RNF43-203ENST00000577716 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
RNF43-203ENST00000577716 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
RNF43-203ENST00000577716 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
RNF43-203ENST00000577716 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
RNF43-203ENST00000577716 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
RNF43-203ENST00000577716 WDR62O43379 1518 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
RNF43-203ENST00000577716 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 CPLX1O14810 134 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
RNF43-203ENST00000577716 ADGRF5Q8IZF2 1346 aa13.16□□□□□ -0.3
RNF43-203ENST00000577716 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
RNF43-203ENST00000577716 ESPNB1AK53 854 aa13.15□□□□□ -0.3
RNF43-203ENST00000577716 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
RNF43-203ENST00000577716 FIBPO43427 364 aa13.15□□□□□ -0.3
RNF43-203ENST00000577716 IGHDP01880 384 aa13.15□□□□□ -0.3
RNF43-203ENST00000577716 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
RNF43-203ENST00000577716 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
RNF43-203ENST00000577716 FOSBP53539 338 aa13.14□□□□□ -0.31
RNF43-203ENST00000577716 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
RNF43-203ENST00000577716 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
RNF43-203ENST00000577716 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
RNF43-203ENST00000577716 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
RNF43-203ENST00000577716 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
RNF43-203ENST00000577716 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 TRIM27P14373 513 aa13.13□□□□□ -0.31
RNF43-203ENST00000577716 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 APPP05067 770 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
RNF43-203ENST00000577716 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 TPM3P06753 285 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
RNF43-203ENST00000577716 PSMA5P28066 241 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 TRDNQ13061 729 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 MPNDQ8N594 471 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 SCAF11Q99590 1463 aaKnown RBP13.11□□□□□ -0.31
RNF43-203ENST00000577716 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
RNF43-203ENST00000577716 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
RNF43-203ENST00000577716 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
RNF43-203ENST00000577716 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
RNF43-203ENST00000577716 TPM2P07951 284 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 PDCP20941 246 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 ABCC11Q96J66 1382 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 TRIM29Q14134 588 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
RNF43-203ENST00000577716 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
RNF43-203ENST00000577716 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 IL1RAPL2Q9NP60 686 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 WDR33Q9C0J8 1336 aaKnown RBP13.09□□□□□ -0.31
RNF43-203ENST00000577716 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
RNF43-203ENST00000577716 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 MAGI3Q5TCQ9 1506 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
RNF43-203ENST00000577716 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms