RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 PANK1Q8TE04 598 aa10.66□□□□□ -0.7
NCBP3-205ENST00000575815 POLKQ9UBT6 870 aa10.66□□□□□ -0.7
NCBP3-205ENST00000575815 FCHSD2O94868 740 aa10.65□□□□□ -0.7
NCBP3-205ENST00000575815 MCM10Q7L590 875 aa10.65□□□□□ -0.7
NCBP3-205ENST00000575815 ABCC11Q96J66 1382 aa10.65□□□□□ -0.7
NCBP3-205ENST00000575815 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
NCBP3-205ENST00000575815 GNAI1P63096 354 aa10.65□□□□□ -0.7
NCBP3-205ENST00000575815 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
NCBP3-205ENST00000575815 TET3O43151 1660 aa10.65□□□□□ -0.71
NCBP3-205ENST00000575815 DIP2CQ9Y2E4 1556 aa10.65□□□□□ -0.71
NCBP3-205ENST00000575815 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
NCBP3-205ENST00000575815 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
NCBP3-205ENST00000575815 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
NCBP3-205ENST00000575815 PARD3Q8TEW0 1356 aa10.64□□□□□ -0.71
NCBP3-205ENST00000575815 OS9Q13438 667 aaPredicted RBP10.64□□□□□ -0.71
NCBP3-205ENST00000575815 ARHGAP31Q2M1Z3 1444 aa10.64□□□□□ -0.71
NCBP3-205ENST00000575815 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
NCBP3-205ENST00000575815 CLTCL1P53675 1640 aa10.64□□□□□ -0.71
NCBP3-205ENST00000575815 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 UNC13BO14795 1591 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 KCNH5Q8NCM2 988 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 NPHP1O15259 732 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 ABCA6Q8N139 1617 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
NCBP3-205ENST00000575815 INO80Q9ULG1 1556 aaPredicted RBP10.63□□□□□ -0.71
NCBP3-205ENST00000575815 ROBO2Q9HCK4 1378 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 MSH6P52701 1360 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 MEX3CQ5U5Q3 659 aaKnown RBP10.62□□□□□ -0.71
NCBP3-205ENST00000575815 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
NCBP3-205ENST00000575815 PUS7Q96PZ0 661 aaKnown RBP10.62□□□□□ -0.71
NCBP3-205ENST00000575815 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
NCBP3-205ENST00000575815 CEP152O94986 1710 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 PLEKHO1Q53GL0 409 aaPredicted RBP10.61□□□□□ -0.71
NCBP3-205ENST00000575815 E9PCH4 1651 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 KAT6BQ8WYB5 2073 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 A2ML1A8K2U0 1454 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 NINLQ9Y2I6 1382 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
NCBP3-205ENST00000575815 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
NCBP3-205ENST00000575815 CHMP4BQ9H444 224 aaKnown RBP10.6□□□□□ -0.71
NCBP3-205ENST00000575815 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
NCBP3-205ENST00000575815 SLFN5Q08AF3 891 aa10.6□□□□□ -0.71
NCBP3-205ENST00000575815 AIMP1Q12904 312 aaKnown RBP10.6□□□□□ -0.71
NCBP3-205ENST00000575815 KIF1BO60333 1816 aa10.6□□□□□ -0.71
NCBP3-205ENST00000575815 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
NCBP3-205ENST00000575815 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
NCBP3-205ENST00000575815 LRRC59Q96AG4 307 aaKnown RBP10.59□□□□□ -0.71
NCBP3-205ENST00000575815 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
NCBP3-205ENST00000575815 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
NCBP3-205ENST00000575815 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
NCBP3-205ENST00000575815 RWDD1Q9H446 243 aaPredicted RBP10.59□□□□□ -0.71
NCBP3-205ENST00000575815 GCP02774 474 aa10.58□□□□□ -0.71
NCBP3-205ENST00000575815 KDM5CP41229 1560 aa10.58□□□□□ -0.71
NCBP3-205ENST00000575815 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.71
NCBP3-205ENST00000575815 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 PPRC1Q5VV67 1664 aaKnown RBP10.58□□□□□ -0.72
NCBP3-205ENST00000575815 PLEKHG1Q9ULL1 1385 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 HSP90AA1P07900 732 aaKnown RBP10.58□□□□□ -0.72
NCBP3-205ENST00000575815 CHMP3Q9Y3E7 222 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 NSD2O96028 1365 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 MYOM2P54296 1465 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 GLI2P10070 1586 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.72
NCBP3-205ENST00000575815 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
NCBP3-205ENST00000575815 TTC21AQ8NDW8 1320 aa10.57□□□□□ -0.72
NCBP3-205ENST00000575815 SPHKAPQ2M3C7 1700 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 C20orf194Q5TEA3 1177 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 NOB1Q9ULX3 412 aaKnown RBP10.56□□□□□ -0.72
NCBP3-205ENST00000575815 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
NCBP3-205ENST00000575815 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 SBNO2Q9Y2G9 1366 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 ZNF335Q9H4Z2 1342 aaPredicted RBP10.55□□□□□ -0.72
NCBP3-205ENST00000575815 TMEM94Q12767 1356 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 EYA1Q99502 592 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
NCBP3-205ENST00000575815 HDGFL1Q5TGJ6 251 aa10.54□□□□□ -0.72
NCBP3-205ENST00000575815 SIRT1Q96EB6 747 aa10.54□□□□□ -0.72
NCBP3-205ENST00000575815 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
NCBP3-205ENST00000575815 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
NCBP3-205ENST00000575815 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
NCBP3-205ENST00000575815 CHMP4AQ9BY43 222 aa10.54□□□□□ -0.72
NCBP3-205ENST00000575815 CLTCQ00610 1675 aaKnown RBP10.54□□□□□ -0.72
NCBP3-205ENST00000575815 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
NCBP3-205ENST00000575815 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
NCBP3-205ENST00000575815 FRMPD1Q5SYB0 1578 aa10.54□□□□□ -0.72
NCBP3-205ENST00000575815 PTCD1O75127 700 aaKnown RBP10.53□□□□□ -0.72
NCBP3-205ENST00000575815 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
NCBP3-205ENST00000575815 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
NCBP3-205ENST00000575815 KIF16BQ96L93 1317 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms