RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
CDH5-205ENST00000565334 KNDC1Q76NI1 1749 aa24■■□□□ 1.43
CDH5-205ENST00000565334 CDC42BPGQ6DT37 1551 aa23.99■■□□□ 1.43
CDH5-205ENST00000565334 MLECQ14165 292 aa23.99■■□□□ 1.43
CDH5-205ENST00000565334 TECPR2O15040 1411 aa23.99■■□□□ 1.43
CDH5-205ENST00000565334 IL16Q14005 1332 aa23.98■■□□□ 1.43
CDH5-205ENST00000565334 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
CDH5-205ENST00000565334 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
CDH5-205ENST00000565334 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
CDH5-205ENST00000565334 CLUAP1Q96AJ1 413 aa23.96■■□□□ 1.43
CDH5-205ENST00000565334 U2SURPO15042 1029 aaKnown RBP23.96■■□□□ 1.43
CDH5-205ENST00000565334 TNRQ92752 1358 aa23.96■■□□□ 1.43
CDH5-205ENST00000565334 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.42
CDH5-205ENST00000565334 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
CDH5-205ENST00000565334 CPSF1Q10570 1443 aaKnown RBP23.94■■□□□ 1.42
CDH5-205ENST00000565334 WAPLQ7Z5K2 1190 aa23.94■■□□□ 1.42
CDH5-205ENST00000565334 CPS1P31327 1500 aa23.94■■□□□ 1.42
CDH5-205ENST00000565334 WASLO00401 505 aaPredicted RBP23.93■■□□□ 1.42
CDH5-205ENST00000565334 FAM161AQ3B820 660 aa23.93■■□□□ 1.42
CDH5-205ENST00000565334 PAK3O75914 559 aaPredicted RBP23.92■■□□□ 1.42
CDH5-205ENST00000565334 DDRGK1Q96HY6 314 aa23.92■■□□□ 1.42
CDH5-205ENST00000565334 METP08581 1390 aa23.91■■□□□ 1.42
CDH5-205ENST00000565334 FCHSD2O94868 740 aa23.9■■□□□ 1.42
CDH5-205ENST00000565334 FRAT1Q92837 279 aaPredicted RBP23.9■■□□□ 1.42
CDH5-205ENST00000565334 COG6Q9Y2V7 657 aa23.9■■□□□ 1.42
CDH5-205ENST00000565334 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
CDH5-205ENST00000565334 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
CDH5-205ENST00000565334 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
CDH5-205ENST00000565334 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.42
CDH5-205ENST00000565334 TRIM35Q9UPQ4 493 aa23.89■■□□□ 1.41
CDH5-205ENST00000565334 TMEM2Q9UHN6 1383 aa23.88■■□□□ 1.41
CDH5-205ENST00000565334 AATKQ6ZMQ8 1374 aa23.87■■□□□ 1.41
CDH5-205ENST00000565334 UBR1Q8IWV7 1749 aa23.86■■□□□ 1.41
CDH5-205ENST00000565334 NEFMP07197 916 aa23.86■■□□□ 1.41
CDH5-205ENST00000565334 SKAP1Q86WV1 359 aa23.86■■□□□ 1.41
CDH5-205ENST00000565334 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
CDH5-205ENST00000565334 IGHDP01880 384 aa23.85■■□□□ 1.41
CDH5-205ENST00000565334 ZKSCAN2Q63HK3 967 aa23.85■■□□□ 1.41
CDH5-205ENST00000565334 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
CDH5-205ENST00000565334 RIPK4P57078 832 aa23.84■■□□□ 1.41
CDH5-205ENST00000565334 C8orf34Q49A92 452 aa23.84■■□□□ 1.41
CDH5-205ENST00000565334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
CDH5-205ENST00000565334 CCDC61Q9Y6R9 512 aa23.84■■□□□ 1.41
CDH5-205ENST00000565334 LRRC7Q96NW7 1537 aa23.83■■□□□ 1.41
CDH5-205ENST00000565334 MON2Q7Z3U7 1717 aa23.83■■□□□ 1.41
CDH5-205ENST00000565334 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.4
CDH5-205ENST00000565334 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
CDH5-205ENST00000565334 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
CDH5-205ENST00000565334 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
CDH5-205ENST00000565334 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
CDH5-205ENST00000565334 RGS3P49796 1198 aa23.8■■□□□ 1.4
CDH5-205ENST00000565334 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
CDH5-205ENST00000565334 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
CDH5-205ENST00000565334 RLBP1P12271 317 aa23.79■■□□□ 1.4
CDH5-205ENST00000565334 CALD1Q05682 793 aaKnown RBP23.79■■□□□ 1.4
CDH5-205ENST00000565334 DZIP1LQ8IYY4 767 aaKnown RBP23.79■■□□□ 1.4
CDH5-205ENST00000565334 ADAMTS13Q76LX8 1427 aa23.79■■□□□ 1.4
CDH5-205ENST00000565334 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
CDH5-205ENST00000565334 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
CDH5-205ENST00000565334 BCL2L13Q9BXK5 485 aa23.78■■□□□ 1.4
CDH5-205ENST00000565334 AKAP12Q02952 1782 aa23.78■■□□□ 1.4
CDH5-205ENST00000565334 RWDD1Q9H446 243 aaPredicted RBP23.78■■□□□ 1.4
CDH5-205ENST00000565334 SMC4Q9NTJ3 1288 aa23.78■■□□□ 1.4
CDH5-205ENST00000565334 FTSJ3Q8IY81 847 aaKnown RBP23.77■■□□□ 1.4
CDH5-205ENST00000565334 COG3Q96JB2 828 aa23.77■■□□□ 1.4
CDH5-205ENST00000565334 C3P01024 1663 aa23.76■■□□□ 1.39
CDH5-205ENST00000565334 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
CDH5-205ENST00000565334 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
CDH5-205ENST00000565334 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
CDH5-205ENST00000565334 KIF16BQ96L93 1317 aa23.76■■□□□ 1.39
CDH5-205ENST00000565334 NFE2L2Q16236 605 aa23.75■■□□□ 1.39
CDH5-205ENST00000565334 IL13P35225 146 aa23.74■■□□□ 1.39
CDH5-205ENST00000565334 NME9Q86XW9 330 aa23.74■■□□□ 1.39
CDH5-205ENST00000565334 PCDHB15Q9Y5E8 787 aa23.74■■□□□ 1.39
CDH5-205ENST00000565334 IPO8O15397 1037 aaKnown RBP23.73■■□□□ 1.39
CDH5-205ENST00000565334 SSH1Q8WYL5 1049 aa23.73■■□□□ 1.39
CDH5-205ENST00000565334 DDX19BQ9UMR2 479 aa23.73■■□□□ 1.39
CDH5-205ENST00000565334 ROBO2Q9HCK4 1378 aa23.73■■□□□ 1.39
CDH5-205ENST00000565334 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
CDH5-205ENST00000565334 PPM1GO15355 546 aaPredicted RBP23.72■■□□□ 1.39
CDH5-205ENST00000565334 TNNQ9UQP3 1299 aa23.72■■□□□ 1.39
CDH5-205ENST00000565334 RTL5Q5HYW3 569 aaPredicted RBP23.72■■□□□ 1.39
CDH5-205ENST00000565334 ATF7IPQ6VMQ6 1270 aa23.72■■□□□ 1.39
CDH5-205ENST00000565334 BRPF1P55201 1214 aaPredicted RBP23.71■■□□□ 1.39
CDH5-205ENST00000565334 LMOD3Q0VAK6 560 aa23.71■■□□□ 1.39
CDH5-205ENST00000565334 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
CDH5-205ENST00000565334 VIRMAQ69YN4 1812 aaKnown RBP23.7■■□□□ 1.39
CDH5-205ENST00000565334 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.39
CDH5-205ENST00000565334 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
CDH5-205ENST00000565334 TRIM27P14373 513 aa23.69■■□□□ 1.38
CDH5-205ENST00000565334 ANO8Q9HCE9 1232 aaPredicted RBP23.69■■□□□ 1.38
CDH5-205ENST00000565334 SLIT1O75093 1534 aa23.69■■□□□ 1.38
CDH5-205ENST00000565334 NRKQ7Z2Y5 1582 aa23.68■■□□□ 1.38
CDH5-205ENST00000565334 PLEKHG3A1L390 1219 aa23.68■■□□□ 1.38
CDH5-205ENST00000565334 EID1Q9Y6B2 187 aa23.68■■□□□ 1.38
CDH5-205ENST00000565334 ARHGAP23Q9P227 1491 aa23.68■■□□□ 1.38
CDH5-205ENST00000565334 GNAI1P63096 354 aa23.67■■□□□ 1.38
CDH5-205ENST00000565334 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
CDH5-205ENST00000565334 NBR1Q14596 966 aa23.66■■□□□ 1.38
CDH5-205ENST00000565334 HDAC1Q13547 482 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms