RNA–Protein interactions for RNA: ENST00000557814.5

PKNOX2-208, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-208ENST00000557814 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
PKNOX2-208ENST00000557814 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
PKNOX2-208ENST00000557814 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
PKNOX2-208ENST00000557814 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 PHF8Q9UPP1 1060 aa9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 NPC1L1Q9UHC9 1359 aa9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
PKNOX2-208ENST00000557814 PXDNQ92626 1479 aa9.43□□□□□ -0.9
PKNOX2-208ENST00000557814 USP6P35125 1406 aa9.43□□□□□ -0.9
PKNOX2-208ENST00000557814 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
PKNOX2-208ENST00000557814 SOS2Q07890 1332 aaPredicted RBP9.43□□□□□ -0.9
PKNOX2-208ENST00000557814 SLC12A5Q9H2X9 1139 aa9.43□□□□□ -0.9
PKNOX2-208ENST00000557814 EDC4Q6P2E9 1401 aaKnown RBP9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 ACEP12821 1306 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 ORAI2Q96SN7 254 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
PKNOX2-208ENST00000557814 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
PKNOX2-208ENST00000557814 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
PKNOX2-208ENST00000557814 AKAP12Q02952 1782 aa9.4□□□□□ -0.9
PKNOX2-208ENST00000557814 USP31Q70CQ4 1352 aa9.4□□□□□ -0.9
PKNOX2-208ENST00000557814 MON2Q7Z3U7 1717 aa9.4□□□□□ -0.9
PKNOX2-208ENST00000557814 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
PKNOX2-208ENST00000557814 ESCO1Q5FWF5 840 aa9.4□□□□□ -0.9
PKNOX2-208ENST00000557814 BLMP54132 1417 aaPredicted RBP9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 PANK3Q9H999 370 aa9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 TRPM3Q9HCF6 1732 aaPredicted RBP9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 ATRNO75882 1429 aa9.39□□□□□ -0.91
PKNOX2-208ENST00000557814 NSD2O96028 1365 aa9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 NUTM2FA1L443 756 aa9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 FOXO3O43524 673 aa9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 USP21Q9UK80 565 aa9.38□□□□□ -0.91
PKNOX2-208ENST00000557814 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
PKNOX2-208ENST00000557814 USP19O94966 1318 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 PSME1Q06323 249 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 KRT28Q7Z3Y7 464 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 FNBP4Q8N3X1 1017 aaPredicted RBP9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 TNS3Q68CZ2 1445 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 NSD3Q9BZ95 1437 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
PKNOX2-208ENST00000557814 CGNL1Q0VF96 1302 aa9.35□□□□□ -0.91
PKNOX2-208ENST00000557814 FYB1O15117 783 aa9.35□□□□□ -0.91
PKNOX2-208ENST00000557814 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 ZNF784Q8NCA9 323 aaPredicted RBP9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 LRRC59Q96AG4 307 aaKnown RBP9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 PIK3C2AO00443 1686 aa9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 SLIT3O75094 1523 aa9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 PARD3Q8TEW0 1356 aa9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
PKNOX2-208ENST00000557814 C1QTNF8P60827 252 aa9.33□□□□□ -0.92
PKNOX2-208ENST00000557814 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
PKNOX2-208ENST00000557814 AATKQ6ZMQ8 1374 aa9.33□□□□□ -0.92
PKNOX2-208ENST00000557814 MARF1Q9Y4F3 1742 aaKnown RBP9.32□□□□□ -0.92
PKNOX2-208ENST00000557814 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
PKNOX2-208ENST00000557814 SMG6Q86US8 1419 aaKnown RBP9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 NFAT5O94916 1531 aa9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 CPDO75976 1380 aa9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 KIF24Q5T7B8 1368 aa9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 ABCC6O95255 1503 aa9.31□□□□□ -0.92
PKNOX2-208ENST00000557814 INSRP06213 1382 aa9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 NME9Q86XW9 330 aa9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 PHRF1Q9P1Y6 1649 aaKnown RBP9.3□□□□□ -0.92
PKNOX2-208ENST00000557814 UTRNP46939 3433 aa9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 RALBP1Q15311 655 aa9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 PRKRIP1Q9H875 184 aaPredicted RBP9.29□□□□□ -0.92
PKNOX2-208ENST00000557814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
PKNOX2-208ENST00000557814 KCNH5Q8NCM2 988 aa9.28□□□□□ -0.92
PKNOX2-208ENST00000557814 COG3Q96JB2 828 aa9.28□□□□□ -0.92
PKNOX2-208ENST00000557814 KIF20BQ96Q89 1820 aa9.28□□□□□ -0.92
PKNOX2-208ENST00000557814 GCP02774 474 aa9.27□□□□□ -0.93
PKNOX2-208ENST00000557814 NLRP6P59044 892 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms