RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
PRKCH-222ENST00000556778 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
PRKCH-222ENST00000556778 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
PRKCH-222ENST00000556778 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-222ENST00000556778 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-222ENST00000556778 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-222ENST00000556778 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
PRKCH-222ENST00000556778 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
PRKCH-222ENST00000556778 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
PRKCH-222ENST00000556778 ACEP12821 1306 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 ATP7BP35670 1465 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 ADGRB2O60241 1585 aa12.41□□□□□ -0.42
PRKCH-222ENST00000556778 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
PRKCH-222ENST00000556778 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-222ENST00000556778 FMN2Q9NZ56 1722 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 JCADQ9P266 1359 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 DISP3Q9P2K9 1392 aa12.4□□□□□ -0.42
PRKCH-222ENST00000556778 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-222ENST00000556778 PXDNQ92626 1479 aa12.4□□□□□ -0.43
PRKCH-222ENST00000556778 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
PRKCH-222ENST00000556778 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-222ENST00000556778 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
PRKCH-222ENST00000556778 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
PRKCH-222ENST00000556778 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-222ENST00000556778 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-222ENST00000556778 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
PRKCH-222ENST00000556778 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
PRKCH-222ENST00000556778 HAX1O00165 279 aa12.37□□□□□ -0.43
PRKCH-222ENST00000556778 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
PRKCH-222ENST00000556778 EIF4G2P78344 907 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCH-222ENST00000556778 RGS17Q9UGC6 210 aaPredicted RBP12.37□□□□□ -0.43
PRKCH-222ENST00000556778 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
PRKCH-222ENST00000556778 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
PRKCH-222ENST00000556778 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
PRKCH-222ENST00000556778 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
PRKCH-222ENST00000556778 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
PRKCH-222ENST00000556778 TMF1P82094 1093 aa12.35□□□□□ -0.43
PRKCH-222ENST00000556778 LRP6O75581 1613 aa12.35□□□□□ -0.43
PRKCH-222ENST00000556778 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
PRKCH-222ENST00000556778 MIER1Q8N108 512 aa12.34□□□□□ -0.43
PRKCH-222ENST00000556778 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
PRKCH-222ENST00000556778 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
PRKCH-222ENST00000556778 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
PRKCH-222ENST00000556778 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-222ENST00000556778 EVX2Q03828 476 aa12.33□□□□□ -0.44
PRKCH-222ENST00000556778 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
PRKCH-222ENST00000556778 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
PRKCH-222ENST00000556778 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
PRKCH-222ENST00000556778 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
PRKCH-222ENST00000556778 C8orf37Q96NL8 207 aa12.32□□□□□ -0.44
PRKCH-222ENST00000556778 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-222ENST00000556778 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
PRKCH-222ENST00000556778 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
PRKCH-222ENST00000556778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRKCH-222ENST00000556778 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
PRKCH-222ENST00000556778 CD163L1Q9NR16 1453 aa12.31□□□□□ -0.44
PRKCH-222ENST00000556778 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
PRKCH-222ENST00000556778 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
PRKCH-222ENST00000556778 USP6P35125 1406 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 POTEAQ6S8J7 498 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 ILDR2Q71H61 639 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 NME9Q86XW9 330 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
PRKCH-222ENST00000556778 MED1Q15648 1581 aaPredicted RBP12.29□□□□□ -0.44
PRKCH-222ENST00000556778 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
PRKCH-222ENST00000556778 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
PRKCH-222ENST00000556778 NLRP6P59044 892 aa12.28□□□□□ -0.44
PRKCH-222ENST00000556778 KIF1AQ12756 1690 aa12.28□□□□□ -0.44
PRKCH-222ENST00000556778 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
PRKCH-222ENST00000556778 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
PRKCH-222ENST00000556778 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
PRKCH-222ENST00000556778 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-222ENST00000556778 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.45
PRKCH-222ENST00000556778 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-222ENST00000556778 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
PRKCH-222ENST00000556778 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
PRKCH-222ENST00000556778 SOX12O15370 315 aa12.26□□□□□ -0.45
PRKCH-222ENST00000556778 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
PRKCH-222ENST00000556778 AFF2P51816 1311 aa12.26□□□□□ -0.45
PRKCH-222ENST00000556778 FBLN1P23142 703 aa12.25□□□□□ -0.45
PRKCH-222ENST00000556778 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
PRKCH-222ENST00000556778 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
PRKCH-222ENST00000556778 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
PRKCH-222ENST00000556778 GCP02774 474 aa12.24□□□□□ -0.45
PRKCH-222ENST00000556778 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
PRKCH-222ENST00000556778 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
PRKCH-222ENST00000556778 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-222ENST00000556778 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-222ENST00000556778 PANK3Q9H999 370 aa12.24□□□□□ -0.45
PRKCH-222ENST00000556778 USP21Q9UK80 565 aa12.24□□□□□ -0.45
PRKCH-222ENST00000556778 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-222ENST00000556778 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms