RNA–Protein interactions for RNA: ENST00000554569.1

RIPK3-203, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-203ENST00000554569 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
RIPK3-203ENST00000554569 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
RIPK3-203ENST00000554569 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
RIPK3-203ENST00000554569 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
RIPK3-203ENST00000554569 PLEKHF1Q96S99 279 aa13.27□□□□□ -0.29
RIPK3-203ENST00000554569 ADGRB2O60241 1585 aa13.27□□□□□ -0.29
RIPK3-203ENST00000554569 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
RIPK3-203ENST00000554569 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
RIPK3-203ENST00000554569 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
RIPK3-203ENST00000554569 GGNBP2Q9H3C7 697 aa13.26□□□□□ -0.29
RIPK3-203ENST00000554569 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
RIPK3-203ENST00000554569 ATP7BP35670 1465 aa13.25□□□□□ -0.29
RIPK3-203ENST00000554569 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
RIPK3-203ENST00000554569 DIAPH1O60610 1272 aaKnown RBP13.25□□□□□ -0.29
RIPK3-203ENST00000554569 ZMYM3Q14202 1370 aa13.24□□□□□ -0.29
RIPK3-203ENST00000554569 FCHSD2O94868 740 aa13.24□□□□□ -0.29
RIPK3-203ENST00000554569 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
RIPK3-203ENST00000554569 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
RIPK3-203ENST00000554569 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
RIPK3-203ENST00000554569 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
RIPK3-203ENST00000554569 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
RIPK3-203ENST00000554569 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
RIPK3-203ENST00000554569 ESF1Q9H501 851 aaKnown RBP13.22□□□□□ -0.29
RIPK3-203ENST00000554569 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
RIPK3-203ENST00000554569 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
RIPK3-203ENST00000554569 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
RIPK3-203ENST00000554569 IGHDP01880 384 aa13.21□□□□□ -0.29
RIPK3-203ENST00000554569 C8orf34Q49A92 452 aa13.21□□□□□ -0.29
RIPK3-203ENST00000554569 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
RIPK3-203ENST00000554569 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.29
RIPK3-203ENST00000554569 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
RIPK3-203ENST00000554569 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
RIPK3-203ENST00000554569 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
RIPK3-203ENST00000554569 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
RIPK3-203ENST00000554569 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
RIPK3-203ENST00000554569 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
RIPK3-203ENST00000554569 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
RIPK3-203ENST00000554569 NEFMP07197 916 aa13.19□□□□□ -0.3
RIPK3-203ENST00000554569 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
RIPK3-203ENST00000554569 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
RIPK3-203ENST00000554569 TECPR2O15040 1411 aa13.19□□□□□ -0.3
RIPK3-203ENST00000554569 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
RIPK3-203ENST00000554569 EDC4Q6P2E9 1401 aaKnown RBP13.19□□□□□ -0.3
RIPK3-203ENST00000554569 AATKQ6ZMQ8 1374 aa13.19□□□□□ -0.3
RIPK3-203ENST00000554569 RIPK4P57078 832 aa13.18□□□□□ -0.3
RIPK3-203ENST00000554569 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
RIPK3-203ENST00000554569 WAPLQ7Z5K2 1190 aa13.18□□□□□ -0.3
RIPK3-203ENST00000554569 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
RIPK3-203ENST00000554569 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
RIPK3-203ENST00000554569 ZBTB22O15209 634 aa13.17□□□□□ -0.3
RIPK3-203ENST00000554569 IPO8O15397 1037 aaKnown RBP13.17□□□□□ -0.3
RIPK3-203ENST00000554569 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
RIPK3-203ENST00000554569 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
RIPK3-203ENST00000554569 SKAP1Q86WV1 359 aa13.17□□□□□ -0.3
RIPK3-203ENST00000554569 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
RIPK3-203ENST00000554569 RGS3P49796 1198 aa13.16□□□□□ -0.3
RIPK3-203ENST00000554569 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
RIPK3-203ENST00000554569 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
RIPK3-203ENST00000554569 TNRQ92752 1358 aa13.16□□□□□ -0.3
RIPK3-203ENST00000554569 RLBP1P12271 317 aa13.15□□□□□ -0.3
RIPK3-203ENST00000554569 MLECQ14165 292 aa13.15□□□□□ -0.3
RIPK3-203ENST00000554569 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
RIPK3-203ENST00000554569 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
RIPK3-203ENST00000554569 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
RIPK3-203ENST00000554569 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
RIPK3-203ENST00000554569 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
RIPK3-203ENST00000554569 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
RIPK3-203ENST00000554569 FTSJ3Q8IY81 847 aaKnown RBP13.14□□□□□ -0.31
RIPK3-203ENST00000554569 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
RIPK3-203ENST00000554569 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
RIPK3-203ENST00000554569 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
RIPK3-203ENST00000554569 METP08581 1390 aa13.14□□□□□ -0.31
RIPK3-203ENST00000554569 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
RIPK3-203ENST00000554569 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
RIPK3-203ENST00000554569 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
RIPK3-203ENST00000554569 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
RIPK3-203ENST00000554569 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
RIPK3-203ENST00000554569 TSR2Q969E8 191 aaKnown RBP13.13□□□□□ -0.31
RIPK3-203ENST00000554569 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
RIPK3-203ENST00000554569 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
RIPK3-203ENST00000554569 TMEM2Q9UHN6 1383 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 IL13P35225 146 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 NBR1Q14596 966 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
RIPK3-203ENST00000554569 COG3Q96JB2 828 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 NRXN3Q9Y4C0 1643 aa13.12□□□□□ -0.31
RIPK3-203ENST00000554569 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
RIPK3-203ENST00000554569 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
RIPK3-203ENST00000554569 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 GNAI1P63096 354 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 CPS1P31327 1500 aa13.11□□□□□ -0.31
RIPK3-203ENST00000554569 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
RIPK3-203ENST00000554569 DEKP35659 375 aaKnown RBP13.1□□□□□ -0.31
RIPK3-203ENST00000554569 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
RIPK3-203ENST00000554569 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms