RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 C20orf194Q5TEA3 1177 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-209ENST00000550020 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.57
TMEM116-209ENST00000550020 EID1Q9Y6B2 187 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 PLEKHG1Q9ULL1 1385 aa11.52□□□□□ -0.57
TMEM116-209ENST00000550020 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
TMEM116-209ENST00000550020 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
TMEM116-209ENST00000550020 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
TMEM116-209ENST00000550020 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
TMEM116-209ENST00000550020 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
TMEM116-209ENST00000550020 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-209ENST00000550020 AATKQ6ZMQ8 1374 aa11.51□□□□□ -0.57
TMEM116-209ENST00000550020 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
TMEM116-209ENST00000550020 PPIP5K1Q6PFW1 1433 aa11.51□□□□□ -0.57
TMEM116-209ENST00000550020 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 BCAR3O75815 825 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
TMEM116-209ENST00000550020 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 WAPLQ7Z5K2 1190 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 PLEKHF1Q96S99 279 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
TMEM116-209ENST00000550020 METP08581 1390 aa11.5□□□□□ -0.57
TMEM116-209ENST00000550020 MSH5O43196 834 aa11.49□□□□□ -0.57
TMEM116-209ENST00000550020 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
TMEM116-209ENST00000550020 NUDT16Q96DE0 195 aaKnown RBP11.49□□□□□ -0.57
TMEM116-209ENST00000550020 COG3Q96JB2 828 aa11.49□□□□□ -0.57
TMEM116-209ENST00000550020 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
TMEM116-209ENST00000550020 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
TMEM116-209ENST00000550020 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
TMEM116-209ENST00000550020 CHMP4BQ9H444 224 aaKnown RBP11.48□□□□□ -0.57
TMEM116-209ENST00000550020 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-209ENST00000550020 RIPK4P57078 832 aa11.47□□□□□ -0.57
TMEM116-209ENST00000550020 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
TMEM116-209ENST00000550020 TXNDC2Q86VQ3 553 aa11.47□□□□□ -0.57
TMEM116-209ENST00000550020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM116-209ENST00000550020 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-209ENST00000550020 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-209ENST00000550020 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
TMEM116-209ENST00000550020 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.57
TMEM116-209ENST00000550020 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
TMEM116-209ENST00000550020 RWDD1Q9H446 243 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-209ENST00000550020 POLKQ9UBT6 870 aa11.46□□□□□ -0.57
TMEM116-209ENST00000550020 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-209ENST00000550020 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
TMEM116-209ENST00000550020 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
TMEM116-209ENST00000550020 THEMISQ8N1K5 641 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-209ENST00000550020 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
TMEM116-209ENST00000550020 COG6Q9Y2V7 657 aa11.44□□□□□ -0.58
TMEM116-209ENST00000550020 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
TMEM116-209ENST00000550020 DIP2AQ14689 1571 aa11.44□□□□□ -0.58
TMEM116-209ENST00000550020 SLIT1O75093 1534 aa11.44□□□□□ -0.58
TMEM116-209ENST00000550020 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-209ENST00000550020 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 GNAI1P63096 354 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
TMEM116-209ENST00000550020 NFE2L2Q16236 605 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
TMEM116-209ENST00000550020 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-209ENST00000550020 DDX19BQ9UMR2 479 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
TMEM116-209ENST00000550020 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
TMEM116-209ENST00000550020 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
TMEM116-209ENST00000550020 MON2Q7Z3U7 1717 aa11.42□□□□□ -0.58
TMEM116-209ENST00000550020 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
TMEM116-209ENST00000550020 PTCH1Q13635 1447 aa11.42□□□□□ -0.58
TMEM116-209ENST00000550020 TTC21AQ8NDW8 1320 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 IL13P35225 146 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 NME9Q86XW9 330 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
TMEM116-209ENST00000550020 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.58
TMEM116-209ENST00000550020 BRPF1P55201 1214 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-209ENST00000550020 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.58
TMEM116-209ENST00000550020 NPM2Q86SE8 214 aaKnown RBP11.4□□□□□ -0.58
TMEM116-209ENST00000550020 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
TMEM116-209ENST00000550020 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
TMEM116-209ENST00000550020 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
TMEM116-209ENST00000550020 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
TMEM116-209ENST00000550020 ARHGAP45Q92619 1136 aa11.38□□□□□ -0.59
TMEM116-209ENST00000550020 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
TMEM116-209ENST00000550020 C3P01024 1663 aa11.38□□□□□ -0.59
TMEM116-209ENST00000550020 USP6P35125 1406 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 IGHDP01880 384 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 LTKP29376 864 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 RGS3P49796 1198 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-209ENST00000550020 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
TMEM116-209ENST00000550020 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
TMEM116-209ENST00000550020 ACEP12821 1306 aa11.36□□□□□ -0.59
TMEM116-209ENST00000550020 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
TMEM116-209ENST00000550020 HDAC1Q13547 482 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms