RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PAK3O75914 559 aaPredicted RBP32.05■■■□□ 2.72
SMARCD1-203ENST00000547247 SPATA31A3Q5VYP0 1347 aa32.05■■■□□ 2.72
SMARCD1-203ENST00000547247 MED1Q15648 1581 aaPredicted RBP32.05■■■□□ 2.72
SMARCD1-203ENST00000547247 TRPM3Q9HCF6 1732 aaPredicted RBP32.04■■■□□ 2.72
SMARCD1-203ENST00000547247 TNS3Q68CZ2 1445 aa32.02■■■□□ 2.72
SMARCD1-203ENST00000547247 MON2Q7Z3U7 1717 aa32.01■■■□□ 2.72
SMARCD1-203ENST00000547247 SSH2Q76I76 1423 aa32.01■■■□□ 2.71
SMARCD1-203ENST00000547247 LMOD2Q6P5Q4 547 aa32■■■□□ 2.71
SMARCD1-203ENST00000547247 EDC4Q6P2E9 1401 aaKnown RBP31.99■■■□□ 2.71
SMARCD1-203ENST00000547247 TTC21BQ7Z4L5 1316 aa31.98■■■□□ 2.71
SMARCD1-203ENST00000547247 ARHGEF10O15013 1369 aa31.97■■■□□ 2.71
SMARCD1-203ENST00000547247 PANK3Q9H999 370 aa31.97■■■□□ 2.71
SMARCD1-203ENST00000547247 PNPLA6Q8IY17 1366 aa31.96■■■□□ 2.71
SMARCD1-203ENST00000547247 TTC21AQ8NDW8 1320 aa31.96■■■□□ 2.71
SMARCD1-203ENST00000547247 NRKQ7Z2Y5 1582 aa31.95■■■□□ 2.71
SMARCD1-203ENST00000547247 ABTB2Q8N961 1025 aa31.95■■■□□ 2.71
SMARCD1-203ENST00000547247 ALS2Q96Q42 1657 aa31.95■■■□□ 2.71
SMARCD1-203ENST00000547247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.94■■■□□ 2.7
SMARCD1-203ENST00000547247 SPATA31A6Q5VVP1 1343 aa31.94■■■□□ 2.7
SMARCD1-203ENST00000547247 CARD14Q9BXL6 1004 aa31.93■■■□□ 2.7
SMARCD1-203ENST00000547247 ZNF316A6NFI3 1004 aaPredicted RBP31.92■■■□□ 2.7
SMARCD1-203ENST00000547247 NSD3Q9BZ95 1437 aa31.89■■■□□ 2.7
SMARCD1-203ENST00000547247 NUTM2GQ5VZR2 741 aa31.89■■■□□ 2.7
SMARCD1-203ENST00000547247 LRP6O75581 1613 aa31.89■■■□□ 2.69
SMARCD1-203ENST00000547247 COL22A1Q8NFW1 1626 aaPredicted RBP31.88■■■□□ 2.69
SMARCD1-203ENST00000547247 NLRP6P59044 892 aa31.87■■■□□ 2.69
SMARCD1-203ENST00000547247 NLRP13Q86W25 1043 aa31.87■■■□□ 2.69
SMARCD1-203ENST00000547247 NUTM2BA6NNL0 878 aaPredicted RBP31.85■■■□□ 2.69
SMARCD1-203ENST00000547247 NUTM2EB1AL46 878 aaPredicted RBP31.85■■■□□ 2.69
SMARCD1-203ENST00000547247 NME9Q86XW9 330 aa31.85■■■□□ 2.69
SMARCD1-203ENST00000547247 NUTM2AQ8IVF1 878 aaPredicted RBP31.85■■■□□ 2.69
SMARCD1-203ENST00000547247 PIK3C2AO00443 1686 aa31.85■■■□□ 2.69
SMARCD1-203ENST00000547247 PLEKHG5O94827 1062 aa31.84■■■□□ 2.69
SMARCD1-203ENST00000547247 CABLES1Q8TDN4 633 aa31.82■■■□□ 2.68
SMARCD1-203ENST00000547247 KNSTRNQ9Y448 316 aa31.82■■■□□ 2.68
SMARCD1-203ENST00000547247 CGNL1Q0VF96 1302 aa31.82■■■□□ 2.68
SMARCD1-203ENST00000547247 PHF23Q9BUL5 403 aaPredicted RBP31.81■■■□□ 2.68
SMARCD1-203ENST00000547247 FYB1O15117 783 aa31.81■■■□□ 2.68
SMARCD1-203ENST00000547247 USP31Q70CQ4 1352 aa31.81■■■□□ 2.68
SMARCD1-203ENST00000547247 HAP1P54257 671 aaPredicted RBP31.8■■■□□ 2.68
SMARCD1-203ENST00000547247 ZRANB1Q9UGI0 708 aa31.8■■■□□ 2.68
SMARCD1-203ENST00000547247 USP19O94966 1318 aa31.78■■■□□ 2.68
SMARCD1-203ENST00000547247 PER1O15534 1290 aaPredicted RBP31.78■■■□□ 2.68
SMARCD1-203ENST00000547247 MEX3CQ5U5Q3 659 aaKnown RBP31.78■■■□□ 2.68
SMARCD1-203ENST00000547247 DDX10Q13206 875 aaKnown RBP31.77■■■□□ 2.68
SMARCD1-203ENST00000547247 COG3Q96JB2 828 aa31.77■■■□□ 2.68
SMARCD1-203ENST00000547247 GGNBP2Q9H3C7 697 aa31.77■■■□□ 2.68
SMARCD1-203ENST00000547247 OVOS2A0A0J9YW53 1432 aa31.75■■■□□ 2.67
SMARCD1-203ENST00000547247 OVOS2Q6IE36 1432 aa31.75■■■□□ 2.67
SMARCD1-203ENST00000547247 KIF20BQ96Q89 1820 aa31.74■■■□□ 2.67
SMARCD1-203ENST00000547247 CRYBG1Q9Y4K1 1723 aa31.74■■■□□ 2.67
SMARCD1-203ENST00000547247 USP54Q70EL1 1684 aa31.73■■■□□ 2.67
SMARCD1-203ENST00000547247 GCP02774 474 aa31.73■■■□□ 2.67
SMARCD1-203ENST00000547247 ABCA3Q99758 1704 aa31.73■■■□□ 2.67
SMARCD1-203ENST00000547247 MARF1Q9Y4F3 1742 aaKnown RBP31.72■■■□□ 2.67
SMARCD1-203ENST00000547247 ADAMTS2O95450 1211 aa31.72■■■□□ 2.67
SMARCD1-203ENST00000547247 PHRF1Q9P1Y6 1649 aaKnown RBP31.71■■■□□ 2.67
SMARCD1-203ENST00000547247 KCNH5Q8NCM2 988 aa31.71■■■□□ 2.67
SMARCD1-203ENST00000547247 SLIT3O75094 1523 aa31.71■■■□□ 2.67
SMARCD1-203ENST00000547247 AMER1Q5JTC6 1135 aaPredicted RBP31.7■■■□□ 2.67
SMARCD1-203ENST00000547247 NSD2O96028 1365 aa31.7■■■□□ 2.67
SMARCD1-203ENST00000547247 SOX12O15370 315 aa31.67■■■□□ 2.66
SMARCD1-203ENST00000547247 RGS17Q9UGC6 210 aaPredicted RBP31.67■■■□□ 2.66
SMARCD1-203ENST00000547247 C8orf37Q96NL8 207 aa31.66■■■□□ 2.66
SMARCD1-203ENST00000547247 ZC3H6P61129 1189 aaKnown RBP31.65■■■□□ 2.66
SMARCD1-203ENST00000547247 NPC1L1Q9UHC9 1359 aa31.64■■■□□ 2.66
SMARCD1-203ENST00000547247 ANKRD26Q9UPS8 1709 aa31.62■■■□□ 2.65
SMARCD1-203ENST00000547247 CC2D1BQ5T0F9 858 aaKnown RBP31.61■■■□□ 2.65
SMARCD1-203ENST00000547247 KIAA0232Q92628 1395 aa31.61■■■□□ 2.65
SMARCD1-203ENST00000547247 NFAT5O94916 1531 aa31.61■■■□□ 2.65
SMARCD1-203ENST00000547247 PRDM11Q9NQV5 511 aa31.6■■■□□ 2.65
SMARCD1-203ENST00000547247 CPDO75976 1380 aa31.6■■■□□ 2.65
SMARCD1-203ENST00000547247 MORC1Q86VD1 984 aa31.6■■■□□ 2.65
SMARCD1-203ENST00000547247 AFF2P51816 1311 aa31.6■■■□□ 2.65
SMARCD1-203ENST00000547247 NGLY1Q96IV0 654 aa31.59■■■□□ 2.65
SMARCD1-203ENST00000547247 FAM83GA6ND36 823 aa31.57■■■□□ 2.64
SMARCD1-203ENST00000547247 CNGB1Q14028 1251 aaPredicted RBP31.57■■■□□ 2.64
SMARCD1-203ENST00000547247 ARHGEF25Q86VW2 580 aa31.57■■■□□ 2.64
SMARCD1-203ENST00000547247 ZBTB7CA1YPR0 619 aa31.56■■■□□ 2.64
SMARCD1-203ENST00000547247 FBLN1P23142 703 aa31.56■■■□□ 2.64
SMARCD1-203ENST00000547247 CHRNA2Q15822 529 aa31.55■■■□□ 2.64
SMARCD1-203ENST00000547247 TNNT2P45379 298 aaPredicted RBP31.54■■■□□ 2.64
SMARCD1-203ENST00000547247 ZNF772Q68DY9 489 aaPredicted RBP31.54■■■□□ 2.64
SMARCD1-203ENST00000547247 POTEAQ6S8J7 498 aa31.54■■■□□ 2.64
SMARCD1-203ENST00000547247 ILDR2Q71H61 639 aa31.52■■■□□ 2.64
SMARCD1-203ENST00000547247 COL14A1Q05707 1796 aaKnown RBP31.52■■■□□ 2.64
SMARCD1-203ENST00000547247 AATKQ6ZMQ8 1374 aa31.51■■■□□ 2.64
SMARCD1-203ENST00000547247 RRS1Q15050 365 aaKnown RBP31.51■■■□□ 2.63
SMARCD1-203ENST00000547247 FNBP4Q8N3X1 1017 aaPredicted RBP31.51■■■□□ 2.63
SMARCD1-203ENST00000547247 MAP3K19Q56UN5 1328 aa31.49■■■□□ 2.63
SMARCD1-203ENST00000547247 PLCH1Q4KWH8 1693 aa31.49■■■□□ 2.63
SMARCD1-203ENST00000547247 LTN1O94822 1766 aa31.48■■■□□ 2.63
SMARCD1-203ENST00000547247 SLIT2O94813 1529 aa31.48■■■□□ 2.63
SMARCD1-203ENST00000547247 BTG4Q9NY30 223 aa31.47■■■□□ 2.63
SMARCD1-203ENST00000547247 USP21Q9UK80 565 aa31.47■■■□□ 2.63
SMARCD1-203ENST00000547247 AMPHP49418 695 aa31.46■■■□□ 2.63
SMARCD1-203ENST00000547247 POLKQ9UBT6 870 aa31.44■■■□□ 2.62
SMARCD1-203ENST00000547247 EMILIN1Q9Y6C2 1016 aa31.44■■■□□ 2.62
SMARCD1-203ENST00000547247 LMO7Q8WWI1 1683 aa31.44■■■□□ 2.62
SMARCD1-203ENST00000547247 ABCC6O95255 1503 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms