RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRKAB1-209ENST00000545870 ESF1Q9H501 851 aaKnown RBP10.78□□□□□ -0.68
PRKAB1-209ENST00000545870 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.69
PRKAB1-209ENST00000545870 ZMYM3Q14202 1370 aa10.77□□□□□ -0.69
PRKAB1-209ENST00000545870 TSPOAP1O95153 1857 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 CPS1P31327 1500 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 BCAR3O75815 825 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 MAPK8IP3Q9UPT6 1336 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 TNRQ92752 1358 aa10.76□□□□□ -0.69
PRKAB1-209ENST00000545870 EDC4Q6P2E9 1401 aaKnown RBP10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 ZBTB22O15209 634 aa10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 CANXP27824 592 aaKnown RBP10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 PLEKHF1Q96S99 279 aa10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
PRKAB1-209ENST00000545870 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 DIAPH1O60610 1272 aaKnown RBP10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 FCHSD2O94868 740 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 GGNBP2Q9H3C7 697 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 CABP1Q9NZU7 370 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 AATKQ6ZMQ8 1374 aa10.74□□□□□ -0.69
PRKAB1-209ENST00000545870 WASLO00401 505 aaPredicted RBP10.73□□□□□ -0.69
PRKAB1-209ENST00000545870 FAM161AQ3B820 660 aa10.73□□□□□ -0.69
PRKAB1-209ENST00000545870 PMFBP1Q8TBY8 1022 aa10.73□□□□□ -0.69
PRKAB1-209ENST00000545870 TMEM2Q9UHN6 1383 aa10.73□□□□□ -0.69
PRKAB1-209ENST00000545870 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
PRKAB1-209ENST00000545870 ZNF428Q96B54 188 aa10.72□□□□□ -0.69
PRKAB1-209ENST00000545870 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
PRKAB1-209ENST00000545870 CDK12Q9NYV4 1490 aaPredicted RBP10.72□□□□□ -0.69
PRKAB1-209ENST00000545870 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
PRKAB1-209ENST00000545870 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.69
PRKAB1-209ENST00000545870 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
PRKAB1-209ENST00000545870 PPIP5K1Q6PFW1 1433 aa10.71□□□□□ -0.69
PRKAB1-209ENST00000545870 METP08581 1390 aa10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 PLEKHG1Q9ULL1 1385 aa10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 NEFMP07197 916 aa10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 UBR1Q8IWV7 1749 aa10.7□□□□□ -0.7
PRKAB1-209ENST00000545870 MLECQ14165 292 aa10.69□□□□□ -0.7
PRKAB1-209ENST00000545870 ZKSCAN2Q63HK3 967 aa10.69□□□□□ -0.7
PRKAB1-209ENST00000545870 WAPLQ7Z5K2 1190 aa10.69□□□□□ -0.7
PRKAB1-209ENST00000545870 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
PRKAB1-209ENST00000545870 MON2Q7Z3U7 1717 aa10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 ALDH1L2Q3SY69 923 aa10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 PANK1Q8TE04 598 aa10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 NUDT16Q96DE0 195 aaKnown RBP10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 RWDD1Q9H446 243 aaPredicted RBP10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 POLKQ9UBT6 870 aa10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
PRKAB1-209ENST00000545870 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 RIPK4P57078 832 aa10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 FRAT1Q92837 279 aaPredicted RBP10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
PRKAB1-209ENST00000545870 KIF16BQ96L93 1317 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 NFE2L2Q16236 605 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 COG3Q96JB2 828 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 SLIT1O75093 1534 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 AKAP12Q02952 1782 aa10.66□□□□□ -0.7
PRKAB1-209ENST00000545870 DIP2AQ14689 1571 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 PLEKHG3A1L390 1219 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 IGHDP01880 384 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 EXOSC9Q06265 439 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 ARHGAP23Q9P227 1491 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 C3P01024 1663 aa10.65□□□□□ -0.7
PRKAB1-209ENST00000545870 ITSN1Q15811 1721 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 IL13P35225 146 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 USP35Q9P2H5 1018 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 DDX19BQ9UMR2 479 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 PTCH1Q13635 1447 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 NRKQ7Z2Y5 1582 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 ROBO2Q9HCK4 1378 aa10.64□□□□□ -0.71
PRKAB1-209ENST00000545870 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
PRKAB1-209ENST00000545870 RLBP1P12271 317 aa10.63□□□□□ -0.71
PRKAB1-209ENST00000545870 PRKAR2BP31323 418 aa10.63□□□□□ -0.71
PRKAB1-209ENST00000545870 GNAI1P63096 354 aa10.63□□□□□ -0.71
PRKAB1-209ENST00000545870 HDAC1Q13547 482 aaPredicted RBP10.63□□□□□ -0.71
PRKAB1-209ENST00000545870 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms