RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
CDCA3-205ENST00000535871 PRKRIP1Q9H875 184 aaPredicted RBP8.87□□□□□ -0.99
CDCA3-205ENST00000535871 TOPAZ1Q8N9V7 1692 aa8.87□□□□□ -0.99
CDCA3-205ENST00000535871 PARD3Q8TEW0 1356 aa8.86□□□□□ -0.99
CDCA3-205ENST00000535871 CGNL1Q0VF96 1302 aa8.86□□□□□ -0.99
CDCA3-205ENST00000535871 FMN2Q9NZ56 1722 aa8.86□□□□□ -0.99
CDCA3-205ENST00000535871 CADPS2Q86UW7 1296 aa8.86□□□□□ -0.99
CDCA3-205ENST00000535871 NUDT16Q96DE0 195 aaKnown RBP8.86□□□□□ -0.99
CDCA3-205ENST00000535871 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
CDCA3-205ENST00000535871 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
CDCA3-205ENST00000535871 SAFB2Q14151 953 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDCA3-205ENST00000535871 PROSER2Q86WR7 435 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-205ENST00000535871 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
CDCA3-205ENST00000535871 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
CDCA3-205ENST00000535871 PPIP5K1Q6PFW1 1433 aa8.85□□□□□ -0.99
CDCA3-205ENST00000535871 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
CDCA3-205ENST00000535871 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
CDCA3-205ENST00000535871 A0A1W2PP64 1363 aa8.84□□□□□ -0.99
CDCA3-205ENST00000535871 MSH6P52701 1360 aa8.84□□□□□ -0.99
CDCA3-205ENST00000535871 TMEM94Q12767 1356 aa8.84□□□□□ -0.99
CDCA3-205ENST00000535871 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 TMC1Q8TDI8 760 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 CARD14Q9BXL6 1004 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 CABP1Q9NZU7 370 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 AKAP12Q02952 1782 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 INSRP06213 1382 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 IQSEC2Q5JU85 1478 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
CDCA3-205ENST00000535871 MYBBP1AQ9BQG0 1328 aaKnown RBP8.82□□□□□ -1
CDCA3-205ENST00000535871 PRR36Q9H6K5 1346 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 KIF1AQ12756 1690 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 MST1RQ04912 1400 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 SSH2Q76I76 1423 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 PLEKHG5O94827 1062 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 NLRP13Q86W25 1043 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 POLR3GLQ9BT43 218 aa8.82□□□□□ -1
CDCA3-205ENST00000535871 USP6P35125 1406 aa8.81□□□□□ -1
CDCA3-205ENST00000535871 NSD3Q9BZ95 1437 aa8.81□□□□□ -1
CDCA3-205ENST00000535871 ATF3P18847 181 aa8.81□□□□□ -1
CDCA3-205ENST00000535871 RNF39Q9H2S5 420 aa8.8□□□□□ -1
CDCA3-205ENST00000535871 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
CDCA3-205ENST00000535871 USP31Q70CQ4 1352 aa8.8□□□□□ -1
CDCA3-205ENST00000535871 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
CDCA3-205ENST00000535871 LTBP4Q8N2S1 1624 aa8.8□□□□□ -1
CDCA3-205ENST00000535871 USP54Q70EL1 1684 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 NRKQ7Z2Y5 1582 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 AATKQ6ZMQ8 1374 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 SPDYE6P0CI01 402 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 SPDYE2Q495Y8 402 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 C14orf37Q86TY3 774 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
CDCA3-205ENST00000535871 ANKRD26Q9UPS8 1709 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 ACEP12821 1306 aa8.79□□□□□ -1
CDCA3-205ENST00000535871 ZNF335Q9H4Z2 1342 aaPredicted RBP8.79□□□□□ -1
CDCA3-205ENST00000535871 KIF24Q5T7B8 1368 aa8.78□□□□□ -1
CDCA3-205ENST00000535871 FYB1O15117 783 aa8.78□□□□□ -1
CDCA3-205ENST00000535871 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
CDCA3-205ENST00000535871 NGDNQ8NEJ9 315 aaKnown RBP8.77□□□□□ -1.01
CDCA3-205ENST00000535871 SSUH2Q9Y2M2 353 aa8.77□□□□□ -1.01
CDCA3-205ENST00000535871 NPHP3Q7Z494 1330 aa8.77□□□□□ -1.01
CDCA3-205ENST00000535871 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1.01
CDCA3-205ENST00000535871 SBNO1A3KN83 1393 aa8.76□□□□□ -1.01
CDCA3-205ENST00000535871 KIF20BQ96Q89 1820 aa8.76□□□□□ -1.01
CDCA3-205ENST00000535871 PSME1Q06323 249 aa8.76□□□□□ -1.01
CDCA3-205ENST00000535871 OVOS2A0A0J9YW53 1432 aa8.76□□□□□ -1.01
CDCA3-205ENST00000535871 OVOS2Q6IE36 1432 aa8.76□□□□□ -1.01
CDCA3-205ENST00000535871 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
CDCA3-205ENST00000535871 MORC1Q86VD1 984 aa8.75□□□□□ -1.01
CDCA3-205ENST00000535871 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
CDCA3-205ENST00000535871 RGPD8O14715 1765 aaPredicted RBP8.75□□□□□ -1.01
CDCA3-205ENST00000535871 PNPLA6Q8IY17 1366 aa8.74□□□□□ -1.01
CDCA3-205ENST00000535871 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
CDCA3-205ENST00000535871 C1QBPQ07021 282 aaKnown RBP8.74□□□□□ -1.01
CDCA3-205ENST00000535871 ESCO1Q5FWF5 840 aa8.74□□□□□ -1.01
CDCA3-205ENST00000535871 NGEFQ8N5V2 710 aa8.74□□□□□ -1.01
CDCA3-205ENST00000535871 COG3Q96JB2 828 aa8.74□□□□□ -1.01
CDCA3-205ENST00000535871 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-205ENST00000535871 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
CDCA3-205ENST00000535871 KCNH5Q8NCM2 988 aa8.73□□□□□ -1.01
CDCA3-205ENST00000535871 ARHGEF10O15013 1369 aa8.73□□□□□ -1.01
CDCA3-205ENST00000535871 ABCC6O95255 1503 aa8.72□□□□□ -1.01
CDCA3-205ENST00000535871 PNISRQ8TF01 805 aaKnown RBP8.72□□□□□ -1.01
CDCA3-205ENST00000535871 CFAP53Q96M91 514 aa8.72□□□□□ -1.01
CDCA3-205ENST00000535871 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
CDCA3-205ENST00000535871 SOS2Q07890 1332 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-205ENST00000535871 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.01
CDCA3-205ENST00000535871 CDK12Q9NYV4 1490 aaPredicted RBP8.71□□□□□ -1.01
CDCA3-205ENST00000535871 BRINP3Q76B58 766 aa8.71□□□□□ -1.02
CDCA3-205ENST00000535871 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.02
CDCA3-205ENST00000535871 ORAI2Q96SN7 254 aa8.71□□□□□ -1.02
CDCA3-205ENST00000535871 PHRF1Q9P1Y6 1649 aaKnown RBP8.71□□□□□ -1.02
CDCA3-205ENST00000535871 USP19O94966 1318 aa8.71□□□□□ -1.02
CDCA3-205ENST00000535871 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
CDCA3-205ENST00000535871 PXDNQ92626 1479 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 MED1Q15648 1581 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-205ENST00000535871 AHDC1Q5TGY3 1603 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-205ENST00000535871 PIK3C2AO00443 1686 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms