RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 AKAP12Q02952 1782 aa15.43■□□□□ 0.06
ATM-222ENST00000533733 MAPK8IP3Q9UPT6 1336 aa15.43■□□□□ 0.06
ATM-222ENST00000533733 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
ATM-222ENST00000533733 BCAR3O75815 825 aa15.43■□□□□ 0.06
ATM-222ENST00000533733 RARSP54136 660 aaKnown RBP15.43■□□□□ 0.06
ATM-222ENST00000533733 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
ATM-222ENST00000533733 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
ATM-222ENST00000533733 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
ATM-222ENST00000533733 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
ATM-222ENST00000533733 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
ATM-222ENST00000533733 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
ATM-222ENST00000533733 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
ATM-222ENST00000533733 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
ATM-222ENST00000533733 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
ATM-222ENST00000533733 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
ATM-222ENST00000533733 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
ATM-222ENST00000533733 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
ATM-222ENST00000533733 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
ATM-222ENST00000533733 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
ATM-222ENST00000533733 FCHSD2O94868 740 aa15.38■□□□□ 0.05
ATM-222ENST00000533733 NEFMP07197 916 aa15.38■□□□□ 0.05
ATM-222ENST00000533733 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
ATM-222ENST00000533733 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
ATM-222ENST00000533733 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
ATM-222ENST00000533733 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
ATM-222ENST00000533733 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
ATM-222ENST00000533733 TNRQ92752 1358 aa15.37■□□□□ 0.05
ATM-222ENST00000533733 CDK12Q9NYV4 1490 aaPredicted RBP15.37■□□□□ 0.05
ATM-222ENST00000533733 C3P01024 1663 aa15.37■□□□□ 0.05
ATM-222ENST00000533733 WASLO00401 505 aaPredicted RBP15.37■□□□□ 0.05
ATM-222ENST00000533733 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
ATM-222ENST00000533733 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
ATM-222ENST00000533733 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
ATM-222ENST00000533733 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
ATM-222ENST00000533733 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
ATM-222ENST00000533733 TOPAZ1Q8N9V7 1692 aa15.34■□□□□ 0.05
ATM-222ENST00000533733 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
ATM-222ENST00000533733 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
ATM-222ENST00000533733 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
ATM-222ENST00000533733 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
ATM-222ENST00000533733 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
ATM-222ENST00000533733 COG6Q9Y2V7 657 aa15.33■□□□□ 0.04
ATM-222ENST00000533733 PPM1GO15355 546 aaPredicted RBP15.32■□□□□ 0.04
ATM-222ENST00000533733 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
ATM-222ENST00000533733 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
ATM-222ENST00000533733 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
ATM-222ENST00000533733 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
ATM-222ENST00000533733 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
ATM-222ENST00000533733 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
ATM-222ENST00000533733 ALDH1L2Q3SY69 923 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 METP08581 1390 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 RIPK4P57078 832 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
ATM-222ENST00000533733 PLEKHG1Q9ULL1 1385 aa15.3■□□□□ 0.04
ATM-222ENST00000533733 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
ATM-222ENST00000533733 MLECQ14165 292 aa15.3■□□□□ 0.04
ATM-222ENST00000533733 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
ATM-222ENST00000533733 WAPLQ7Z5K2 1190 aa15.3■□□□□ 0.04
ATM-222ENST00000533733 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
ATM-222ENST00000533733 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
ATM-222ENST00000533733 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
ATM-222ENST00000533733 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
ATM-222ENST00000533733 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
ATM-222ENST00000533733 RIMS1Q86UR5 1692 aaKnown RBP15.29■□□□□ 0.04
ATM-222ENST00000533733 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 IGHDP01880 384 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
ATM-222ENST00000533733 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
ATM-222ENST00000533733 DLG5Q8TDM6 1919 aa15.28■□□□□ 0.04
ATM-222ENST00000533733 RGS3P49796 1198 aa15.27■□□□□ 0.04
ATM-222ENST00000533733 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
ATM-222ENST00000533733 COG3Q96JB2 828 aa15.27■□□□□ 0.04
ATM-222ENST00000533733 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
ATM-222ENST00000533733 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.04
ATM-222ENST00000533733 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.04
ATM-222ENST00000533733 SLIT1O75093 1534 aa15.27■□□□□ 0.04
ATM-222ENST00000533733 NFE2L2Q16236 605 aa15.26■□□□□ 0.03
ATM-222ENST00000533733 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
ATM-222ENST00000533733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATM-222ENST00000533733 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
ATM-222ENST00000533733 RLBP1P12271 317 aa15.24■□□□□ 0.03
ATM-222ENST00000533733 GNAI1P63096 354 aa15.24■□□□□ 0.03
ATM-222ENST00000533733 ARHGAP23Q9P227 1491 aa15.24■□□□□ 0.03
ATM-222ENST00000533733 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 IL13P35225 146 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
ATM-222ENST00000533733 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
ATM-222ENST00000533733 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 FER1L4A9Z1Z3 1794 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
ATM-222ENST00000533733 PTCH1Q13635 1447 aa15.22■□□□□ 0.03
ATM-222ENST00000533733 PLEKHG3A1L390 1219 aa15.22■□□□□ 0.03
ATM-222ENST00000533733 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms