RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
COL16A1-217ENST00000532877 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
COL16A1-217ENST00000532877 TERF2IPQ9NYB0 399 aa19.69■□□□□ 0.74
COL16A1-217ENST00000532877 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
COL16A1-217ENST00000532877 RBM6P78332 1123 aaKnown RBP19.68■□□□□ 0.74
COL16A1-217ENST00000532877 NRKQ7Z2Y5 1582 aa19.68■□□□□ 0.74
COL16A1-217ENST00000532877 ACEP12821 1306 aa19.68■□□□□ 0.74
COL16A1-217ENST00000532877 PNPLA6Q8IY17 1366 aa19.68■□□□□ 0.74
COL16A1-217ENST00000532877 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-217ENST00000532877 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-217ENST00000532877 HDGFL2Q7Z4V5 671 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-217ENST00000532877 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-217ENST00000532877 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
COL16A1-217ENST00000532877 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
COL16A1-217ENST00000532877 KTN1Q86UP2 1357 aaKnown RBP19.66■□□□□ 0.74
COL16A1-217ENST00000532877 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
COL16A1-217ENST00000532877 USP6P35125 1406 aa19.65■□□□□ 0.74
COL16A1-217ENST00000532877 QTRT2Q9H974 415 aaKnown RBP19.64■□□□□ 0.73
COL16A1-217ENST00000532877 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
COL16A1-217ENST00000532877 PER1O15534 1290 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-217ENST00000532877 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
COL16A1-217ENST00000532877 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-217ENST00000532877 KIF20BQ96Q89 1820 aa19.61■□□□□ 0.73
COL16A1-217ENST00000532877 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
COL16A1-217ENST00000532877 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
COL16A1-217ENST00000532877 SSH2Q76I76 1423 aa19.6■□□□□ 0.73
COL16A1-217ENST00000532877 TRPM3Q9HCF6 1732 aaPredicted RBP19.6■□□□□ 0.73
COL16A1-217ENST00000532877 FOXO3O43524 673 aa19.6■□□□□ 0.73
COL16A1-217ENST00000532877 C8orf37Q96NL8 207 aa19.59■□□□□ 0.73
COL16A1-217ENST00000532877 PXDNQ92626 1479 aa19.59■□□□□ 0.73
COL16A1-217ENST00000532877 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.73
COL16A1-217ENST00000532877 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.73
COL16A1-217ENST00000532877 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-217ENST00000532877 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
COL16A1-217ENST00000532877 PSME1Q06323 249 aa19.57■□□□□ 0.72
COL16A1-217ENST00000532877 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-217ENST00000532877 DDX17Q92841 729 aaKnown RBP19.57■□□□□ 0.72
COL16A1-217ENST00000532877 TTC21BQ7Z4L5 1316 aa19.56■□□□□ 0.72
COL16A1-217ENST00000532877 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
COL16A1-217ENST00000532877 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-217ENST00000532877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL16A1-217ENST00000532877 ANKRD26Q9UPS8 1709 aa19.56■□□□□ 0.72
COL16A1-217ENST00000532877 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
COL16A1-217ENST00000532877 ATRNO75882 1429 aa19.55■□□□□ 0.72
COL16A1-217ENST00000532877 MARF1Q9Y4F3 1742 aaKnown RBP19.55■□□□□ 0.72
COL16A1-217ENST00000532877 NSD2O96028 1365 aa19.55■□□□□ 0.72
COL16A1-217ENST00000532877 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
COL16A1-217ENST00000532877 KRT28Q7Z3Y7 464 aa19.54■□□□□ 0.72
COL16A1-217ENST00000532877 FNBP4Q8N3X1 1017 aaPredicted RBP19.54■□□□□ 0.72
COL16A1-217ENST00000532877 ALS2Q96Q42 1657 aa19.54■□□□□ 0.72
COL16A1-217ENST00000532877 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
COL16A1-217ENST00000532877 NGLY1Q96IV0 654 aa19.53■□□□□ 0.72
COL16A1-217ENST00000532877 USP54Q70EL1 1684 aa19.52■□□□□ 0.72
COL16A1-217ENST00000532877 CC2D1BQ5T0F9 858 aaKnown RBP19.52■□□□□ 0.72
COL16A1-217ENST00000532877 NME9Q86XW9 330 aa19.52■□□□□ 0.72
COL16A1-217ENST00000532877 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
COL16A1-217ENST00000532877 FYB1O15117 783 aa19.51■□□□□ 0.71
COL16A1-217ENST00000532877 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
COL16A1-217ENST00000532877 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
COL16A1-217ENST00000532877 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
COL16A1-217ENST00000532877 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
COL16A1-217ENST00000532877 OVOS2A0A0J9YW53 1432 aa19.5■□□□□ 0.71
COL16A1-217ENST00000532877 OVOS2Q6IE36 1432 aa19.5■□□□□ 0.71
COL16A1-217ENST00000532877 PARD3Q8TEW0 1356 aa19.49■□□□□ 0.71
COL16A1-217ENST00000532877 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.48■□□□□ 0.71
COL16A1-217ENST00000532877 ANP32CO43423 234 aa19.48■□□□□ 0.71
COL16A1-217ENST00000532877 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
COL16A1-217ENST00000532877 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
COL16A1-217ENST00000532877 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
COL16A1-217ENST00000532877 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
COL16A1-217ENST00000532877 USP31Q70CQ4 1352 aa19.47■□□□□ 0.71
COL16A1-217ENST00000532877 PRKRIP1Q9H875 184 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-217ENST00000532877 USP21Q9UK80 565 aa19.47■□□□□ 0.71
COL16A1-217ENST00000532877 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
COL16A1-217ENST00000532877 ABTB2Q8N961 1025 aa19.46■□□□□ 0.71
COL16A1-217ENST00000532877 CCDC125Q86Z20 511 aa19.45■□□□□ 0.7
COL16A1-217ENST00000532877 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
COL16A1-217ENST00000532877 BRWD3Q6RI45 1802 aa19.44■□□□□ 0.7
COL16A1-217ENST00000532877 RALBP1Q15311 655 aa19.44■□□□□ 0.7
COL16A1-217ENST00000532877 MORC1Q86VD1 984 aa19.44■□□□□ 0.7
COL16A1-217ENST00000532877 COG3Q96JB2 828 aa19.44■□□□□ 0.7
COL16A1-217ENST00000532877 LRP5O75197 1615 aa19.43■□□□□ 0.7
COL16A1-217ENST00000532877 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
COL16A1-217ENST00000532877 NLRP6P59044 892 aa19.43■□□□□ 0.7
COL16A1-217ENST00000532877 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
COL16A1-217ENST00000532877 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
COL16A1-217ENST00000532877 SLIT3O75094 1523 aa19.42■□□□□ 0.7
COL16A1-217ENST00000532877 GLI3P10071 1580 aa19.41■□□□□ 0.7
COL16A1-217ENST00000532877 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
COL16A1-217ENST00000532877 USP19O94966 1318 aa19.41■□□□□ 0.7
COL16A1-217ENST00000532877 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
COL16A1-217ENST00000532877 ABCA3Q99758 1704 aa19.39■□□□□ 0.7
COL16A1-217ENST00000532877 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-217ENST00000532877 MIER1Q8N108 512 aa19.39■□□□□ 0.69
COL16A1-217ENST00000532877 NFAT5O94916 1531 aa19.39■□□□□ 0.69
COL16A1-217ENST00000532877 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
COL16A1-217ENST00000532877 AATKQ6ZMQ8 1374 aa19.37■□□□□ 0.69
COL16A1-217ENST00000532877 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
COL16A1-217ENST00000532877 SLIT2O94813 1529 aa19.35■□□□□ 0.69
COL16A1-217ENST00000532877 BLMP54132 1417 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms