RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 LRP5O75197 1615 aa5.98□□□□□ -1.45
PVT1-211ENST00000521600 SLIT1O75093 1534 aa5.98□□□□□ -1.45
PVT1-211ENST00000521600 MINK1Q8N4C8 1332 aaPredicted RBP5.98□□□□□ -1.45
PVT1-211ENST00000521600 NWD1Q149M9 1564 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 PHF14O94880 888 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 POTEJP0CG39 1038 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 EN1Q05925 392 aaPredicted RBP5.97□□□□□ -1.45
PVT1-211ENST00000521600 PTGDRQ13258 359 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 CCDC102AQ96A19 550 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 CDHR5Q9HBB8 845 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 KIAA1107Q9UPP5 1409 aa5.97□□□□□ -1.45
PVT1-211ENST00000521600 ERVK-7P63135 1459 aa5.96□□□□□ -1.45
PVT1-211ENST00000521600 AHDC1Q5TGY3 1603 aaPredicted RBP5.96□□□□□ -1.45
PVT1-211ENST00000521600 PRDM15P57071 1507 aaPredicted RBP5.96□□□□□ -1.46
PVT1-211ENST00000521600 POTEB2H3BUK9 544 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 MAP3K7O43318 606 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 RXRBP28702 533 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 LTKP29376 864 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 ZNF772Q68DY9 489 aaPredicted RBP5.96□□□□□ -1.46
PVT1-211ENST00000521600 EPAS1Q99814 870 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 KDM4CQ9H3R0 1056 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 TIMELESSQ9UNS1 1208 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 PCDHGA10Q9Y5H3 936 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 CHD2O14647 1828 aaKnown RBP5.96□□□□□ -1.46
PVT1-211ENST00000521600 PIK3C2BO00750 1634 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 MROH1Q8NDA8 1641 aa5.96□□□□□ -1.46
PVT1-211ENST00000521600 DHX29Q7Z478 1369 aaKnown RBP5.95□□□□□ -1.46
PVT1-211ENST00000521600 ABCC3O15438 1527 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 TET3O43151 1660 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 IRF6O14896 467 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 FGD6Q6ZV73 1430 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 VPS8Q8N3P4 1428 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 SLAIN1Q8ND83 568 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 MBD5Q9P267 1494 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 MYO5BQ9ULV0 1848 aa5.95□□□□□ -1.46
PVT1-211ENST00000521600 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.94□□□□□ -1.46
PVT1-211ENST00000521600 MAST1Q9Y2H9 1570 aa5.94□□□□□ -1.46
PVT1-211ENST00000521600 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
PVT1-211ENST00000521600 MEX3CQ5U5Q3 659 aaKnown RBP5.94□□□□□ -1.46
PVT1-211ENST00000521600 TYW1BQ6NUM6 668 aa5.94□□□□□ -1.46
PVT1-211ENST00000521600 KHSRPQ92945 711 aaKnown RBP eCLIP5.94□□□□□ -1.466e-7■■■■■ 34.9
PVT1-211ENST00000521600 CCDC18Q5T9S5 1454 aa5.94□□□□□ -1.46
PVT1-211ENST00000521600 PLEKHH2Q8IVE3 1493 aa5.94□□□□□ -1.46
PVT1-211ENST00000521600 SPATA31A6Q5VVP1 1343 aa5.94□□□□□ -1.46
PVT1-211ENST00000521600 KIF3BO15066 747 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 NUDT7P0C024 238 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 DOK7Q18PE1 504 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 IL27Q8NEV9 243 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 SCUBE2Q9NQ36 999 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 NPDC1Q9NQX5 325 aaPredicted RBP5.93□□□□□ -1.46
PVT1-211ENST00000521600 NKTRP30414 1462 aaKnown RBP5.93□□□□□ -1.46
PVT1-211ENST00000521600 CAMSAP2Q08AD1 1489 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 AFF2P51816 1311 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 ZNF644Q9H582 1327 aaPredicted RBP5.93□□□□□ -1.46
PVT1-211ENST00000521600 WASHC2CQ9Y4E1 1318 aa5.93□□□□□ -1.46
PVT1-211ENST00000521600 NHSL1Q5SYE7 1610 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 RTEL1-TNFRSF6BF6WH68 1400 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 HOXB3P14651 431 aaPredicted RBP5.92□□□□□ -1.46
PVT1-211ENST00000521600 ARSIQ5FYB1 569 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 ZNF454Q8N9F8 522 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 SLAIN2Q9P270 581 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 BRWD3Q6RI45 1802 aa5.92□□□□□ -1.46
PVT1-211ENST00000521600 CASKIN1Q8WXD9 1431 aa5.91□□□□□ -1.46
PVT1-211ENST00000521600 NUTM2BA6NNL0 878 aaPredicted RBP5.91□□□□□ -1.46
PVT1-211ENST00000521600 NUTM2EB1AL46 878 aaPredicted RBP5.91□□□□□ -1.46
PVT1-211ENST00000521600 KCNA6P17658 529 aa5.91□□□□□ -1.46
PVT1-211ENST00000521600 FOSBP53539 338 aa5.91□□□□□ -1.46
PVT1-211ENST00000521600 AMHR2Q16671 573 aa5.91□□□□□ -1.46
PVT1-211ENST00000521600 NUTM2DQ5VT03 806 aaPredicted RBP5.91□□□□□ -1.46
PVT1-211ENST00000521600 TXNDC2Q86VQ3 553 aa5.91□□□□□ -1.46
PVT1-211ENST00000521600 NUTM2AQ8IVF1 878 aaPredicted RBP5.91□□□□□ -1.46
PVT1-211ENST00000521600 RIMBP2O15034 1052 aa5.9□□□□□ -1.46
PVT1-211ENST00000521600 TTLL12Q14166 644 aaPredicted RBP5.9□□□□□ -1.46
PVT1-211ENST00000521600 PROSER2Q86WR7 435 aaPredicted RBP5.9□□□□□ -1.46
PVT1-211ENST00000521600 PPARGC1BQ86YN6 1023 aaKnown RBP5.9□□□□□ -1.46
PVT1-211ENST00000521600 PARP9Q8IXQ6 854 aa5.9□□□□□ -1.46
PVT1-211ENST00000521600 ZNF710Q8N1W2 664 aa5.9□□□□□ -1.46
PVT1-211ENST00000521600 ZDHHC16Q969W1 377 aa5.9□□□□□ -1.46
PVT1-211ENST00000521600 FAM117AQ9C073 453 aa5.9□□□□□ -1.46
PVT1-211ENST00000521600 MSH6P52701 1360 aa5.9□□□□□ -1.47
PVT1-211ENST00000521600 ATAD2Q6PL18 1390 aa5.9□□□□□ -1.47
PVT1-211ENST00000521600 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
PVT1-211ENST00000521600 C6orf132Q5T0Z8 1188 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 GPR153Q6NV75 609 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 MAMSTRQ6ZN01 415 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 ZSWIM6Q9HCJ5 1215 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 CFDP1Q9UEE9 299 aaPredicted RBP5.89□□□□□ -1.47
PVT1-211ENST00000521600 DAXXQ9UER7 740 aaPredicted RBP5.89□□□□□ -1.47
PVT1-211ENST00000521600 UTRNP46939 3433 aa5.89□□□□□ -1.47
PVT1-211ENST00000521600 RBM6P78332 1123 aaKnown RBP5.88□□□□□ -1.47
PVT1-211ENST00000521600 C14orf37Q86TY3 774 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 CCER1Q8TC90 406 aaPredicted RBP5.88□□□□□ -1.47
PVT1-211ENST00000521600 ADAM33Q9BZ11 813 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 QTRT2Q9H974 415 aaKnown RBP5.88□□□□□ -1.47
PVT1-211ENST00000521600 CCNB3Q8WWL7 1395 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 TMEM2Q9UHN6 1383 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 CCDC141Q6ZP82 1450 aa5.88□□□□□ -1.47
PVT1-211ENST00000521600 FYCO1Q9BQS8 1478 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms