RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
PROM1-215ENST00000513448 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
PROM1-215ENST00000513448 DIAPH1O60610 1272 aaKnown RBP12.01□□□□□ -0.49
PROM1-215ENST00000513448 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
PROM1-215ENST00000513448 RRP7AQ9Y3A4 280 aaKnown RBP12.01□□□□□ -0.49
PROM1-215ENST00000513448 TECPR2O15040 1411 aa12.01□□□□□ -0.49
PROM1-215ENST00000513448 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
PROM1-215ENST00000513448 CDC42BPGQ6DT37 1551 aa12□□□□□ -0.49
PROM1-215ENST00000513448 FCHSD2O94868 740 aa12□□□□□ -0.49
PROM1-215ENST00000513448 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
PROM1-215ENST00000513448 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
PROM1-215ENST00000513448 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
PROM1-215ENST00000513448 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
PROM1-215ENST00000513448 EDC4Q6P2E9 1401 aaKnown RBP11.98□□□□□ -0.49
PROM1-215ENST00000513448 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
PROM1-215ENST00000513448 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
PROM1-215ENST00000513448 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
PROM1-215ENST00000513448 NRXN3Q9Y4C0 1643 aa11.98□□□□□ -0.49
PROM1-215ENST00000513448 KIF13AQ9H1H9 1805 aa11.97□□□□□ -0.49
PROM1-215ENST00000513448 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
PROM1-215ENST00000513448 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
PROM1-215ENST00000513448 NEFMP07197 916 aa11.96□□□□□ -0.49
PROM1-215ENST00000513448 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
PROM1-215ENST00000513448 COG6Q9Y2V7 657 aa11.96□□□□□ -0.49
PROM1-215ENST00000513448 TNRQ92752 1358 aa11.96□□□□□ -0.5
PROM1-215ENST00000513448 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.5
PROM1-215ENST00000513448 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.5
PROM1-215ENST00000513448 PANK1Q8TE04 598 aa11.96□□□□□ -0.5
PROM1-215ENST00000513448 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.5
PROM1-215ENST00000513448 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.5
PROM1-215ENST00000513448 MLECQ14165 292 aa11.95□□□□□ -0.5
PROM1-215ENST00000513448 C8orf34Q49A92 452 aa11.95□□□□□ -0.5
PROM1-215ENST00000513448 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
PROM1-215ENST00000513448 CPS1P31327 1500 aa11.95□□□□□ -0.5
PROM1-215ENST00000513448 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
PROM1-215ENST00000513448 IGHDP01880 384 aa11.94□□□□□ -0.5
PROM1-215ENST00000513448 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
PROM1-215ENST00000513448 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PROM1-215ENST00000513448 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
PROM1-215ENST00000513448 METP08581 1390 aa11.94□□□□□ -0.5
PROM1-215ENST00000513448 RIPK4P57078 832 aa11.94□□□□□ -0.5
PROM1-215ENST00000513448 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
PROM1-215ENST00000513448 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
PROM1-215ENST00000513448 ADRA2BP18089 450 aa11.93□□□□□ -0.5
PROM1-215ENST00000513448 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
PROM1-215ENST00000513448 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
PROM1-215ENST00000513448 ALDH1L2Q3SY69 923 aa11.93□□□□□ -0.5
PROM1-215ENST00000513448 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
PROM1-215ENST00000513448 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
PROM1-215ENST00000513448 NUDT16Q96DE0 195 aaKnown RBP11.93□□□□□ -0.5
PROM1-215ENST00000513448 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
PROM1-215ENST00000513448 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
PROM1-215ENST00000513448 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
PROM1-215ENST00000513448 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
PROM1-215ENST00000513448 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
PROM1-215ENST00000513448 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 RGS3P49796 1198 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
PROM1-215ENST00000513448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.5
PROM1-215ENST00000513448 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
PROM1-215ENST00000513448 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 RLBP1P12271 317 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
PROM1-215ENST00000513448 MAP2P11137 1827 aaKnown RBP11.9□□□□□ -0.5
PROM1-215ENST00000513448 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
PROM1-215ENST00000513448 COG3Q96JB2 828 aa11.9□□□□□ -0.5
PROM1-215ENST00000513448 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
PROM1-215ENST00000513448 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
PROM1-215ENST00000513448 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
PROM1-215ENST00000513448 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 IL13P35225 146 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
PROM1-215ENST00000513448 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
PROM1-215ENST00000513448 PCDHB15Q9Y5E8 787 aa11.89□□□□□ -0.51
PROM1-215ENST00000513448 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
PROM1-215ENST00000513448 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
PROM1-215ENST00000513448 HDAC1Q13547 482 aaPredicted RBP11.88□□□□□ -0.51
PROM1-215ENST00000513448 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
PROM1-215ENST00000513448 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
PROM1-215ENST00000513448 TRIM27P14373 513 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
PROM1-215ENST00000513448 C3P01024 1663 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 GNAI1P63096 354 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 ARHGAP45Q92619 1136 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
PROM1-215ENST00000513448 NME9Q86XW9 330 aa11.86□□□□□ -0.51
PROM1-215ENST00000513448 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
PROM1-215ENST00000513448 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
PROM1-215ENST00000513448 ROBO2Q9HCK4 1378 aa11.85□□□□□ -0.51
PROM1-215ENST00000513448 ZNF853P0CG23 659 aa11.84□□□□□ -0.51
PROM1-215ENST00000513448 NBR1Q14596 966 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms