RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-209ENST00000508017 SMC5Q8IY18 1101 aa16.95■□□□□ 0.3
SNCAIP-209ENST00000508017 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-209ENST00000508017 NSD2O96028 1365 aa16.94■□□□□ 0.3
SNCAIP-209ENST00000508017 GGT6Q6P531 493 aa16.94■□□□□ 0.3
SNCAIP-209ENST00000508017 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
SNCAIP-209ENST00000508017 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
SNCAIP-209ENST00000508017 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
SNCAIP-209ENST00000508017 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-209ENST00000508017 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
SNCAIP-209ENST00000508017 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
SNCAIP-209ENST00000508017 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
SNCAIP-209ENST00000508017 UBE2Q2Q8WVN8 375 aa16.91■□□□□ 0.3
SNCAIP-209ENST00000508017 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
SNCAIP-209ENST00000508017 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
SNCAIP-209ENST00000508017 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 DDIT3P35638 169 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 RIPK4P57078 832 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 SIGLEC1Q9BZZ2 1709 aa16.89■□□□□ 0.29
SNCAIP-209ENST00000508017 NUCB1Q02818 461 aa16.88■□□□□ 0.29
SNCAIP-209ENST00000508017 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-209ENST00000508017 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-209ENST00000508017 HECW2Q9P2P5 1572 aa16.87■□□□□ 0.29
SNCAIP-209ENST00000508017 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
SNCAIP-209ENST00000508017 STK26Q9P289 416 aa16.87■□□□□ 0.29
SNCAIP-209ENST00000508017 IL16Q14005 1332 aa16.86■□□□□ 0.29
SNCAIP-209ENST00000508017 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
SNCAIP-209ENST00000508017 DDX11L8A8MPP1 907 aa16.86■□□□□ 0.29
SNCAIP-209ENST00000508017 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-209ENST00000508017 MRE11P49959 708 aa16.86■□□□□ 0.29
SNCAIP-209ENST00000508017 ABCC3O15438 1527 aa16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 KIF16BQ96L93 1317 aa16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 CHD1LQ86WJ1 897 aa16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 FYB1O15117 783 aa16.85■□□□□ 0.29
SNCAIP-209ENST00000508017 SNX21Q969T3 373 aa16.84■□□□□ 0.29
SNCAIP-209ENST00000508017 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
SNCAIP-209ENST00000508017 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
SNCAIP-209ENST00000508017 CLCN1P35523 988 aa16.84■□□□□ 0.29
SNCAIP-209ENST00000508017 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 KIF2CQ99661 725 aa16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 PNNQ9H307 717 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
SNCAIP-209ENST00000508017 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-209ENST00000508017 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-209ENST00000508017 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
SNCAIP-209ENST00000508017 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-209ENST00000508017 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
SNCAIP-209ENST00000508017 DIAPH1O60610 1272 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-209ENST00000508017 GAS2L3Q86XJ1 694 aa16.81■□□□□ 0.28
SNCAIP-209ENST00000508017 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
SNCAIP-209ENST00000508017 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
SNCAIP-209ENST00000508017 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
SNCAIP-209ENST00000508017 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
SNCAIP-209ENST00000508017 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
SNCAIP-209ENST00000508017 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-209ENST00000508017 MED14O60244 1454 aa16.8■□□□□ 0.28
SNCAIP-209ENST00000508017 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
SNCAIP-209ENST00000508017 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
SNCAIP-209ENST00000508017 FBLN1P23142 703 aa16.79■□□□□ 0.28
SNCAIP-209ENST00000508017 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
SNCAIP-209ENST00000508017 ZBTB7BO15156 539 aaPredicted RBP16.78■□□□□ 0.28
SNCAIP-209ENST00000508017 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
SNCAIP-209ENST00000508017 MYO5BQ9ULV0 1848 aa16.78■□□□□ 0.28
SNCAIP-209ENST00000508017 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
SNCAIP-209ENST00000508017 TERF2IPQ9NYB0 399 aa16.78■□□□□ 0.28
SNCAIP-209ENST00000508017 PTPRMP28827 1452 aa16.77■□□□□ 0.28
SNCAIP-209ENST00000508017 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
SNCAIP-209ENST00000508017 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
SNCAIP-209ENST00000508017 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
SNCAIP-209ENST00000508017 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.28
SNCAIP-209ENST00000508017 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
SNCAIP-209ENST00000508017 PRAM1Q96QH2 718 aa16.77■□□□□ 0.27
SNCAIP-209ENST00000508017 IDI1Q13907 227 aa16.76■□□□□ 0.27
SNCAIP-209ENST00000508017 SIRT2Q8IXJ6 389 aa16.76■□□□□ 0.27
SNCAIP-209ENST00000508017 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
SNCAIP-209ENST00000508017 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
SNCAIP-209ENST00000508017 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 ESPNB1AK53 854 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 GAS2L2Q8NHY3 880 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
SNCAIP-209ENST00000508017 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 VAMP4O75379 141 aa16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 SSFA2P28290 1259 aa16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 FCHSD2O94868 740 aa16.74■□□□□ 0.27
SNCAIP-209ENST00000508017 HMOX1P09601 288 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms