RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NUTM2AQ8IVF1 878 aaPredicted RBP13.74□□□□□ -0.21
NR1I3-220ENST00000505005 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
NR1I3-220ENST00000505005 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
NR1I3-220ENST00000505005 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
NR1I3-220ENST00000505005 NGLY1Q96IV0 654 aa13.73□□□□□ -0.21
NR1I3-220ENST00000505005 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
NR1I3-220ENST00000505005 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
NR1I3-220ENST00000505005 ABTB2Q8N961 1025 aa13.71□□□□□ -0.21
NR1I3-220ENST00000505005 KCNH5Q8NCM2 988 aa13.7□□□□□ -0.22
NR1I3-220ENST00000505005 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
NR1I3-220ENST00000505005 TESK2Q96S53 571 aa13.7□□□□□ -0.22
NR1I3-220ENST00000505005 FNBP4Q8N3X1 1017 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-220ENST00000505005 USP6P35125 1406 aa13.68□□□□□ -0.22
NR1I3-220ENST00000505005 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
NR1I3-220ENST00000505005 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-220ENST00000505005 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
NR1I3-220ENST00000505005 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
NR1I3-220ENST00000505005 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
NR1I3-220ENST00000505005 RXRBP28702 533 aa13.66□□□□□ -0.22
NR1I3-220ENST00000505005 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
NR1I3-220ENST00000505005 USP21Q9UK80 565 aa13.66□□□□□ -0.22
NR1I3-220ENST00000505005 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
NR1I3-220ENST00000505005 AFF2P51816 1311 aa13.65□□□□□ -0.22
NR1I3-220ENST00000505005 NLRP6P59044 892 aa13.65□□□□□ -0.22
NR1I3-220ENST00000505005 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
NR1I3-220ENST00000505005 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
NR1I3-220ENST00000505005 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
NR1I3-220ENST00000505005 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
NR1I3-220ENST00000505005 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
NR1I3-220ENST00000505005 LRP6O75581 1613 aa13.64□□□□□ -0.23
NR1I3-220ENST00000505005 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
NR1I3-220ENST00000505005 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
NR1I3-220ENST00000505005 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
NR1I3-220ENST00000505005 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
NR1I3-220ENST00000505005 PRDM11Q9NQV5 511 aa13.62□□□□□ -0.23
NR1I3-220ENST00000505005 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
NR1I3-220ENST00000505005 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
NR1I3-220ENST00000505005 CPDO75976 1380 aa13.61□□□□□ -0.23
NR1I3-220ENST00000505005 GCP02774 474 aa13.61□□□□□ -0.23
NR1I3-220ENST00000505005 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
NR1I3-220ENST00000505005 USP19O94966 1318 aa13.61□□□□□ -0.23
NR1I3-220ENST00000505005 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
NR1I3-220ENST00000505005 NWD2Q9ULI1 1742 aa13.6□□□□□ -0.23
NR1I3-220ENST00000505005 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
NR1I3-220ENST00000505005 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
NR1I3-220ENST00000505005 RGS17Q9UGC6 210 aaPredicted RBP13.59□□□□□ -0.23
NR1I3-220ENST00000505005 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
NR1I3-220ENST00000505005 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
NR1I3-220ENST00000505005 EVA1CP58658 441 aa13.58□□□□□ -0.24
NR1I3-220ENST00000505005 VPS72Q15906 364 aa13.58□□□□□ -0.24
NR1I3-220ENST00000505005 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
NR1I3-220ENST00000505005 COG3Q96JB2 828 aa13.58□□□□□ -0.24
NR1I3-220ENST00000505005 SLIT2O94813 1529 aa13.58□□□□□ -0.24
NR1I3-220ENST00000505005 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
NR1I3-220ENST00000505005 GJD4Q96KN9 370 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-220ENST00000505005 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
NR1I3-220ENST00000505005 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
NR1I3-220ENST00000505005 SOCS7O14512 581 aa13.56□□□□□ -0.24
NR1I3-220ENST00000505005 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
NR1I3-220ENST00000505005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
NR1I3-220ENST00000505005 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
NR1I3-220ENST00000505005 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
NR1I3-220ENST00000505005 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
NR1I3-220ENST00000505005 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
NR1I3-220ENST00000505005 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
NR1I3-220ENST00000505005 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
NR1I3-220ENST00000505005 ATRNO75882 1429 aa13.55□□□□□ -0.24
NR1I3-220ENST00000505005 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
NR1I3-220ENST00000505005 ABCC6O95255 1503 aa13.54□□□□□ -0.24
NR1I3-220ENST00000505005 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
NR1I3-220ENST00000505005 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
NR1I3-220ENST00000505005 KIAA0232Q92628 1395 aa13.54□□□□□ -0.24
NR1I3-220ENST00000505005 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
NR1I3-220ENST00000505005 SLIT3O75094 1523 aa13.54□□□□□ -0.24
NR1I3-220ENST00000505005 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
NR1I3-220ENST00000505005 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
NR1I3-220ENST00000505005 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 ARHGEF25Q86VW2 580 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 USP54Q70EL1 1684 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
NR1I3-220ENST00000505005 NSD2O96028 1365 aa13.51□□□□□ -0.25
NR1I3-220ENST00000505005 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
NR1I3-220ENST00000505005 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
NR1I3-220ENST00000505005 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
NR1I3-220ENST00000505005 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
NR1I3-220ENST00000505005 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
NR1I3-220ENST00000505005 FYB1O15117 783 aa13.49□□□□□ -0.25
NR1I3-220ENST00000505005 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
NR1I3-220ENST00000505005 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
NR1I3-220ENST00000505005 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
NR1I3-220ENST00000505005 NME9Q86XW9 330 aa13.49□□□□□ -0.25
NR1I3-220ENST00000505005 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
NR1I3-220ENST00000505005 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
NR1I3-220ENST00000505005 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
NR1I3-220ENST00000505005 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
NR1I3-220ENST00000505005 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms