RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 TMF1P82094 1093 aa10.92□□□□□ -0.66
SKP2-203ENST00000504386 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
SKP2-203ENST00000504386 TOPAZ1Q8N9V7 1692 aa10.9□□□□□ -0.66
SKP2-203ENST00000504386 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
SKP2-203ENST00000504386 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
SKP2-203ENST00000504386 NGLY1Q96IV0 654 aa10.9□□□□□ -0.66
SKP2-203ENST00000504386 TERF2IPQ9NYB0 399 aa10.9□□□□□ -0.66
SKP2-203ENST00000504386 LRP6O75581 1613 aa10.89□□□□□ -0.67
SKP2-203ENST00000504386 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
SKP2-203ENST00000504386 C8orf37Q96NL8 207 aa10.89□□□□□ -0.67
SKP2-203ENST00000504386 RNF216Q9NWF9 866 aaPredicted RBP10.89□□□□□ -0.67
SKP2-203ENST00000504386 CABP1Q9NZU7 370 aa10.89□□□□□ -0.67
SKP2-203ENST00000504386 TTC21AQ8NDW8 1320 aa10.88□□□□□ -0.67
SKP2-203ENST00000504386 RGPD8O14715 1765 aaPredicted RBP10.88□□□□□ -0.67
SKP2-203ENST00000504386 ADAMTS2O95450 1211 aa10.88□□□□□ -0.67
SKP2-203ENST00000504386 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
SKP2-203ENST00000504386 AFF2P51816 1311 aa10.87□□□□□ -0.67
SKP2-203ENST00000504386 USP6P35125 1406 aa10.87□□□□□ -0.67
SKP2-203ENST00000504386 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
SKP2-203ENST00000504386 TMC1Q8TDI8 760 aa10.87□□□□□ -0.67
SKP2-203ENST00000504386 TESK2Q96S53 571 aa10.87□□□□□ -0.67
SKP2-203ENST00000504386 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
SKP2-203ENST00000504386 TRPC5Q9UL62 973 aaPredicted RBP10.86□□□□□ -0.67
SKP2-203ENST00000504386 KTN1Q86UP2 1357 aaKnown RBP10.86□□□□□ -0.67
SKP2-203ENST00000504386 TRPM3Q9HCF6 1732 aaPredicted RBP10.85□□□□□ -0.67
SKP2-203ENST00000504386 RXRBP28702 533 aa10.85□□□□□ -0.67
SKP2-203ENST00000504386 USP21Q9UK80 565 aa10.85□□□□□ -0.67
SKP2-203ENST00000504386 HOXD11P31277 338 aaPredicted RBP10.84□□□□□ -0.67
SKP2-203ENST00000504386 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
SKP2-203ENST00000504386 KCNH5Q8NCM2 988 aa10.84□□□□□ -0.67
SKP2-203ENST00000504386 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
SKP2-203ENST00000504386 ALS2Q96Q42 1657 aa10.83□□□□□ -0.68
SKP2-203ENST00000504386 CDK12Q9NYV4 1490 aaPredicted RBP10.83□□□□□ -0.68
SKP2-203ENST00000504386 NLRP6P59044 892 aa10.83□□□□□ -0.68
SKP2-203ENST00000504386 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
SKP2-203ENST00000504386 EDC4Q6P2E9 1401 aaKnown RBP10.83□□□□□ -0.68
SKP2-203ENST00000504386 USP19O94966 1318 aa10.83□□□□□ -0.68
SKP2-203ENST00000504386 UNC5CLQ8IV45 518 aa10.82□□□□□ -0.68
SKP2-203ENST00000504386 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
SKP2-203ENST00000504386 RGS17Q9UGC6 210 aaPredicted RBP10.82□□□□□ -0.68
SKP2-203ENST00000504386 TTC21BQ7Z4L5 1316 aa10.82□□□□□ -0.68
SKP2-203ENST00000504386 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
SKP2-203ENST00000504386 POTEAQ6S8J7 498 aa10.81□□□□□ -0.68
SKP2-203ENST00000504386 CABLES1Q8TDN4 633 aa10.81□□□□□ -0.68
SKP2-203ENST00000504386 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
SKP2-203ENST00000504386 CPDO75976 1380 aa10.8□□□□□ -0.68
SKP2-203ENST00000504386 SLIT2O94813 1529 aa10.8□□□□□ -0.68
SKP2-203ENST00000504386 SOCS7O14512 581 aa10.8□□□□□ -0.68
SKP2-203ENST00000504386 GCP02774 474 aa10.8□□□□□ -0.68
SKP2-203ENST00000504386 SLC12A5Q9H2X9 1139 aa10.8□□□□□ -0.68
SKP2-203ENST00000504386 MARF1Q9Y4F3 1742 aaKnown RBP10.8□□□□□ -0.68
SKP2-203ENST00000504386 ATRNO75882 1429 aa10.79□□□□□ -0.68
SKP2-203ENST00000504386 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
SKP2-203ENST00000504386 A0A1W2PP64 1363 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 NWD2Q9ULI1 1742 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 AKAP12Q02952 1782 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 COL14A1Q05707 1796 aaKnown RBP10.78□□□□□ -0.68
SKP2-203ENST00000504386 FAM83GA6ND36 823 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 VPS72Q15906 364 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 ILDR2Q71H61 639 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
SKP2-203ENST00000504386 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
SKP2-203ENST00000504386 BCL9LQ86UU0 1499 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
SKP2-203ENST00000504386 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.78□□□□□ -0.68
SKP2-203ENST00000504386 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
SKP2-203ENST00000504386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.77□□□□□ -0.69
SKP2-203ENST00000504386 COG3Q96JB2 828 aa10.77□□□□□ -0.69
SKP2-203ENST00000504386 BTG4Q9NY30 223 aa10.77□□□□□ -0.69
SKP2-203ENST00000504386 MON2Q7Z3U7 1717 aa10.76□□□□□ -0.69
SKP2-203ENST00000504386 SLIT3O75094 1523 aa10.76□□□□□ -0.69
SKP2-203ENST00000504386 EVA1CP58658 441 aa10.76□□□□□ -0.69
SKP2-203ENST00000504386 ZC3H6P61129 1189 aaKnown RBP10.76□□□□□ -0.69
SKP2-203ENST00000504386 AATKQ6ZMQ8 1374 aa10.76□□□□□ -0.69
SKP2-203ENST00000504386 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
SKP2-203ENST00000504386 ABCC6O95255 1503 aa10.75□□□□□ -0.69
SKP2-203ENST00000504386 NRKQ7Z2Y5 1582 aa10.75□□□□□ -0.69
SKP2-203ENST00000504386 PHRF1Q9P1Y6 1649 aaKnown RBP10.75□□□□□ -0.69
SKP2-203ENST00000504386 CGNL1Q0VF96 1302 aa10.75□□□□□ -0.69
SKP2-203ENST00000504386 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
SKP2-203ENST00000504386 POLR3GLQ9BT43 218 aa10.74□□□□□ -0.69
SKP2-203ENST00000504386 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
SKP2-203ENST00000504386 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
SKP2-203ENST00000504386 CRYBG1Q9Y4K1 1723 aa10.73□□□□□ -0.69
SKP2-203ENST00000504386 NME9Q86XW9 330 aa10.73□□□□□ -0.69
SKP2-203ENST00000504386 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
SKP2-203ENST00000504386 CHRNA2Q15822 529 aa10.72□□□□□ -0.69
SKP2-203ENST00000504386 ARHGEF25Q86VW2 580 aa10.72□□□□□ -0.69
SKP2-203ENST00000504386 SPATA31A5Q5VU36 1347 aa10.72□□□□□ -0.69
SKP2-203ENST00000504386 SPATA31A7Q8IWB4 1347 aa10.72□□□□□ -0.69
SKP2-203ENST00000504386 USP54Q70EL1 1684 aa10.72□□□□□ -0.69
SKP2-203ENST00000504386 A0A0G2JS52 829 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 ZBTB7CA1YPR0 619 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 C11orf95C9JLR9 678 aaPredicted RBP10.71□□□□□ -0.69
SKP2-203ENST00000504386 RGS12O14924 1447 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 NSD2O96028 1365 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms