RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 CDK19Q9BWU1 502 aa11.46□□□□□ -0.57
PUM1-212ENST00000498627 PHLPP1O60346 1717 aa11.46□□□□□ -0.58
PUM1-212ENST00000498627 USP47Q96K76 1375 aa11.45□□□□□ -0.58
PUM1-212ENST00000498627 WASLO00401 505 aaPredicted RBP11.45□□□□□ -0.58
PUM1-212ENST00000498627 DDX17Q92841 729 aaKnown RBP11.45□□□□□ -0.58
PUM1-212ENST00000498627 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
PUM1-212ENST00000498627 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
PUM1-212ENST00000498627 MST1RQ04912 1400 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 BRINP3Q76B58 766 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 TESK2Q96S53 571 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
PUM1-212ENST00000498627 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
PUM1-212ENST00000498627 SRPK2P78362 688 aaKnown RBP11.42□□□□□ -0.58
PUM1-212ENST00000498627 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
PUM1-212ENST00000498627 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
PUM1-212ENST00000498627 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
PUM1-212ENST00000498627 QRICH2Q9H0J4 1663 aa11.42□□□□□ -0.58
PUM1-212ENST00000498627 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
PUM1-212ENST00000498627 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
PUM1-212ENST00000498627 DCCP43146 1447 aa11.41□□□□□ -0.58
PUM1-212ENST00000498627 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
PUM1-212ENST00000498627 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
PUM1-212ENST00000498627 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.58
PUM1-212ENST00000498627 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
PUM1-212ENST00000498627 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
PUM1-212ENST00000498627 TULP4Q9NRJ4 1543 aa11.4□□□□□ -0.59
PUM1-212ENST00000498627 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 FOXO3O43524 673 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 GSE1Q14687 1217 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
PUM1-212ENST00000498627 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
PUM1-212ENST00000498627 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
PUM1-212ENST00000498627 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
PUM1-212ENST00000498627 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
PUM1-212ENST00000498627 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
PUM1-212ENST00000498627 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
PUM1-212ENST00000498627 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
PUM1-212ENST00000498627 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
PUM1-212ENST00000498627 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
PUM1-212ENST00000498627 LRP6O75581 1613 aa11.37□□□□□ -0.59
PUM1-212ENST00000498627 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
PUM1-212ENST00000498627 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
PUM1-212ENST00000498627 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
PUM1-212ENST00000498627 CCDC61Q9Y6R9 512 aa11.36□□□□□ -0.59
PUM1-212ENST00000498627 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
PUM1-212ENST00000498627 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
PUM1-212ENST00000498627 TMF1P82094 1093 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
PUM1-212ENST00000498627 TMC1Q8TDI8 760 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 ATP7BP35670 1465 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
PUM1-212ENST00000498627 ANKARQ7Z5J8 1434 aa11.35□□□□□ -0.59
PUM1-212ENST00000498627 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
PUM1-212ENST00000498627 ACEP12821 1306 aa11.34□□□□□ -0.59
PUM1-212ENST00000498627 AFF2P51816 1311 aa11.34□□□□□ -0.59
PUM1-212ENST00000498627 PSME1Q06323 249 aa11.33□□□□□ -0.6
PUM1-212ENST00000498627 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
PUM1-212ENST00000498627 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
PUM1-212ENST00000498627 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
PUM1-212ENST00000498627 RGS12O14924 1447 aa11.32□□□□□ -0.6
PUM1-212ENST00000498627 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
PUM1-212ENST00000498627 SOS2Q07890 1332 aaPredicted RBP11.31□□□□□ -0.6
PUM1-212ENST00000498627 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
PUM1-212ENST00000498627 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
PUM1-212ENST00000498627 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
PUM1-212ENST00000498627 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
PUM1-212ENST00000498627 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
PUM1-212ENST00000498627 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
PUM1-212ENST00000498627 TOPAZ1Q8N9V7 1692 aa11.28□□□□□ -0.6
PUM1-212ENST00000498627 PXDNQ92626 1479 aa11.28□□□□□ -0.6
PUM1-212ENST00000498627 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
PUM1-212ENST00000498627 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
PUM1-212ENST00000498627 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
PUM1-212ENST00000498627 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
PUM1-212ENST00000498627 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
PUM1-212ENST00000498627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
PUM1-212ENST00000498627 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.61
PUM1-212ENST00000498627 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
PUM1-212ENST00000498627 KIF1AQ12756 1690 aa11.27□□□□□ -0.61
PUM1-212ENST00000498627 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
PUM1-212ENST00000498627 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
PUM1-212ENST00000498627 RGL2O15211 777 aa11.26□□□□□ -0.61
PUM1-212ENST00000498627 WASHC2AQ641Q2 1341 aa11.26□□□□□ -0.61
PUM1-212ENST00000498627 LRP5O75197 1615 aa11.25□□□□□ -0.61
PUM1-212ENST00000498627 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
PUM1-212ENST00000498627 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
PUM1-212ENST00000498627 TRPC5Q9UL62 973 aaPredicted RBP11.25□□□□□ -0.61
PUM1-212ENST00000498627 A0A1W2PP64 1363 aa11.25□□□□□ -0.61
PUM1-212ENST00000498627 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
PUM1-212ENST00000498627 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
PUM1-212ENST00000498627 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
PUM1-212ENST00000498627 ABTB2Q8N961 1025 aa11.24□□□□□ -0.61
PUM1-212ENST00000498627 C8orf37Q96NL8 207 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms