RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 SMC4Q9NTJ3 1288 aa10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 MADDQ8WXG6 1647 aa10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 GLI2P10070 1586 aa10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 SYNMO15061 1565 aa10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 ZMYM4Q5VZL5 1548 aa10.14□□□□□ -0.79
HLA-DMB-262ENST00000498020 ERVK-7P63135 1459 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 LMOD3Q0VAK6 560 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 NBR1Q14596 966 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 BCL11BQ9C0K0 894 aaPredicted RBP10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 ZKSCAN2Q63HK3 967 aa10.13□□□□□ -0.79
HLA-DMB-262ENST00000498020 PLEKHH1Q9ULM0 1364 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 RIPK4P57078 832 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 RNF17Q9BXT8 1623 aaKnown RBP10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 MAP3K4Q9Y6R4 1608 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 ABCC3O15438 1527 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 ARHGAP31Q2M1Z3 1444 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 NKTRP30414 1462 aaKnown RBP10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 EIF5BO60841 1220 aaKnown RBP10.12□□□□□ -0.79
HLA-DMB-262ENST00000498020 KIF1BO60333 1816 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 BCAR3O75815 825 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 BCL2L13Q9BXK5 485 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 AMOTL2Q9Y2J4 779 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 VWDEQ8N2E2 1590 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 KDM5AP29375 1690 aaKnown RBP10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
HLA-DMB-262ENST00000498020 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
HLA-DMB-262ENST00000498020 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
HLA-DMB-262ENST00000498020 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
HLA-DMB-262ENST00000498020 BECN1Q14457 450 aa10.1□□□□□ -0.79
HLA-DMB-262ENST00000498020 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
HLA-DMB-262ENST00000498020 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 DEPDC5O75140 1603 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 YTHDC2Q9H6S0 1430 aaKnown RBP10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 PANK1Q8TE04 598 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 DZIP1LQ8IYY4 767 aaKnown RBP10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 KIDINS220Q9ULH0 1771 aa10.09□□□□□ -0.79
HLA-DMB-262ENST00000498020 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 RIMS2Q9UQ26 1411 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 CEP152O94986 1710 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 FCHSD2O94868 740 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 WASLO00401 505 aaPredicted RBP10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 FYB1O15117 783 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 ZFYVE9O95405 1425 aa10.08□□□□□ -0.8
HLA-DMB-262ENST00000498020 TEFQ10587 303 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 BACH2Q9BYV9 841 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 CFAP65Q6ZU64 1925 aaKnown RBP10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 TTC5Q8N0Z6 440 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 MSH6P52701 1360 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 DDX19BQ9UMR2 479 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 ABCC11Q96J66 1382 aa10.07□□□□□ -0.8
HLA-DMB-262ENST00000498020 KIF16BQ96L93 1317 aa10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 CDK11BP21127 795 aaKnown RBP10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 TNRQ92752 1358 aa10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 RARSP54136 660 aaKnown RBP10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 GNAI1P63096 354 aa10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 A0A1W2PP64 1363 aa10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 OS9Q13438 667 aaPredicted RBP10.06□□□□□ -0.8
HLA-DMB-262ENST00000498020 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 HMOX1P09601 288 aa10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 ZNF521Q96K83 1311 aa10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 ABCA6Q8N139 1617 aa10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 PRKCSHP14314 528 aaPredicted RBP10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 KIAA1210Q9ULL0 1709 aa10.05□□□□□ -0.8
HLA-DMB-262ENST00000498020 ZMYM3Q14202 1370 aa10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 TAF7LQ5H9L4 462 aa10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 TSR2Q969E8 191 aaKnown RBP10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
HLA-DMB-262ENST00000498020 KAT6BQ8WYB5 2073 aa10.03□□□□□ -0.8
HLA-DMB-262ENST00000498020 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
HLA-DMB-262ENST00000498020 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
HLA-DMB-262ENST00000498020 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
HLA-DMB-262ENST00000498020 KIF13AQ9H1H9 1805 aa10.03□□□□□ -0.8
HLA-DMB-262ENST00000498020 GOLGA6L22H0YM25 854 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms