RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 TTC21BQ7Z4L5 1316 aa21.78■■□□□ 1.08
NELFCD-211ENST00000492016 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.08
NELFCD-211ENST00000492016 TNS3Q68CZ2 1445 aa21.77■■□□□ 1.08
NELFCD-211ENST00000492016 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
NELFCD-211ENST00000492016 ARHGEF10O15013 1369 aa21.76■■□□□ 1.07
NELFCD-211ENST00000492016 XPCQ01831 940 aaPredicted RBP21.76■■□□□ 1.07
NELFCD-211ENST00000492016 CARD14Q9BXL6 1004 aa21.76■■□□□ 1.07
NELFCD-211ENST00000492016 TRPM3Q9HCF6 1732 aaPredicted RBP21.76■■□□□ 1.07
NELFCD-211ENST00000492016 NRKQ7Z2Y5 1582 aa21.75■■□□□ 1.07
NELFCD-211ENST00000492016 NSD3Q9BZ95 1437 aa21.74■■□□□ 1.07
NELFCD-211ENST00000492016 PAK3O75914 559 aaPredicted RBP21.74■■□□□ 1.07
NELFCD-211ENST00000492016 HSPA1LP34931 641 aa21.74■■□□□ 1.07
NELFCD-211ENST00000492016 PER1O15534 1290 aaPredicted RBP21.73■■□□□ 1.07
NELFCD-211ENST00000492016 KNSTRNQ9Y448 316 aa21.73■■□□□ 1.07
NELFCD-211ENST00000492016 CGNL1Q0VF96 1302 aa21.73■■□□□ 1.07
NELFCD-211ENST00000492016 ABTB2Q8N961 1025 aa21.71■■□□□ 1.07
NELFCD-211ENST00000492016 USP31Q70CQ4 1352 aa21.71■■□□□ 1.07
NELFCD-211ENST00000492016 JCADQ9P266 1359 aa21.71■■□□□ 1.07
NELFCD-211ENST00000492016 ALS2Q96Q42 1657 aa21.7■■□□□ 1.06
NELFCD-211ENST00000492016 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
NELFCD-211ENST00000492016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.7■■□□□ 1.06
NELFCD-211ENST00000492016 NSD2O96028 1365 aa21.7■■□□□ 1.06
NELFCD-211ENST00000492016 NPC1L1Q9UHC9 1359 aa21.7■■□□□ 1.06
NELFCD-211ENST00000492016 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
NELFCD-211ENST00000492016 FYB1O15117 783 aa21.68■■□□□ 1.06
NELFCD-211ENST00000492016 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
NELFCD-211ENST00000492016 MED1Q15648 1581 aaPredicted RBP21.66■■□□□ 1.06
NELFCD-211ENST00000492016 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
NELFCD-211ENST00000492016 NME9Q86XW9 330 aa21.66■■□□□ 1.06
NELFCD-211ENST00000492016 COL22A1Q8NFW1 1626 aaPredicted RBP21.66■■□□□ 1.06
NELFCD-211ENST00000492016 USP19O94966 1318 aa21.65■■□□□ 1.06
NELFCD-211ENST00000492016 NLRP6P59044 892 aa21.65■■□□□ 1.06
NELFCD-211ENST00000492016 AMER1Q5JTC6 1135 aaPredicted RBP21.65■■□□□ 1.06
NELFCD-211ENST00000492016 PIK3C2AO00443 1686 aa21.65■■□□□ 1.06
NELFCD-211ENST00000492016 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.06
NELFCD-211ENST00000492016 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.06
NELFCD-211ENST00000492016 SPATA31A6Q5VVP1 1343 aa21.64■■□□□ 1.05
NELFCD-211ENST00000492016 SHPRHQ149N8 1683 aa21.64■■□□□ 1.05
NELFCD-211ENST00000492016 USP54Q70EL1 1684 aa21.64■■□□□ 1.05
NELFCD-211ENST00000492016 COG3Q96JB2 828 aa21.64■■□□□ 1.05
NELFCD-211ENST00000492016 KCNH5Q8NCM2 988 aa21.61■■□□□ 1.05
NELFCD-211ENST00000492016 GGNBP2Q9H3C7 697 aa21.6■■□□□ 1.05
NELFCD-211ENST00000492016 SLIT3O75094 1523 aa21.6■■□□□ 1.05
NELFCD-211ENST00000492016 NUTM2GQ5VZR2 741 aa21.59■■□□□ 1.05
NELFCD-211ENST00000492016 KIF20BQ96Q89 1820 aa21.58■■□□□ 1.05
NELFCD-211ENST00000492016 GCP02774 474 aa21.58■■□□□ 1.05
NELFCD-211ENST00000492016 ZRANB1Q9UGI0 708 aa21.57■■□□□ 1.04
NELFCD-211ENST00000492016 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
NELFCD-211ENST00000492016 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
NELFCD-211ENST00000492016 CRYBG1Q9Y4K1 1723 aa21.55■■□□□ 1.04
NELFCD-211ENST00000492016 CPDO75976 1380 aa21.54■■□□□ 1.04
NELFCD-211ENST00000492016 AATKQ6ZMQ8 1374 aa21.54■■□□□ 1.04
NELFCD-211ENST00000492016 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
NELFCD-211ENST00000492016 CABLES1Q8TDN4 633 aa21.54■■□□□ 1.04
NELFCD-211ENST00000492016 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
NELFCD-211ENST00000492016 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
NELFCD-211ENST00000492016 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
NELFCD-211ENST00000492016 PHRF1Q9P1Y6 1649 aaKnown RBP21.53■■□□□ 1.04
NELFCD-211ENST00000492016 NFAT5O94916 1531 aa21.51■■□□□ 1.03
NELFCD-211ENST00000492016 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
NELFCD-211ENST00000492016 RALBP1Q15311 655 aa21.5■■□□□ 1.03
NELFCD-211ENST00000492016 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
NELFCD-211ENST00000492016 ARHGEF25Q86VW2 580 aa21.49■■□□□ 1.03
NELFCD-211ENST00000492016 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
NELFCD-211ENST00000492016 NUTM2BA6NNL0 878 aaPredicted RBP21.48■■□□□ 1.03
NELFCD-211ENST00000492016 NUTM2EB1AL46 878 aaPredicted RBP21.48■■□□□ 1.03
NELFCD-211ENST00000492016 NUTM2AQ8IVF1 878 aaPredicted RBP21.48■■□□□ 1.03
NELFCD-211ENST00000492016 ABCC6O95255 1503 aa21.47■■□□□ 1.03
NELFCD-211ENST00000492016 LRP6O75581 1613 aa21.46■■□□□ 1.03
NELFCD-211ENST00000492016 KIAA0232Q92628 1395 aa21.46■■□□□ 1.03
NELFCD-211ENST00000492016 PLEKHG5O94827 1062 aa21.45■■□□□ 1.02
NELFCD-211ENST00000492016 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
NELFCD-211ENST00000492016 PRDM11Q9NQV5 511 aa21.45■■□□□ 1.02
NELFCD-211ENST00000492016 RTL1A6NKG5 1358 aa21.45■■□□□ 1.02
NELFCD-211ENST00000492016 SOX12O15370 315 aa21.44■■□□□ 1.02
NELFCD-211ENST00000492016 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
NELFCD-211ENST00000492016 MAP3K19Q56UN5 1328 aa21.44■■□□□ 1.02
NELFCD-211ENST00000492016 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
NELFCD-211ENST00000492016 ADAMTS2O95450 1211 aa21.43■■□□□ 1.02
NELFCD-211ENST00000492016 POLKQ9UBT6 870 aa21.43■■□□□ 1.02
NELFCD-211ENST00000492016 ANP32CO43423 234 aa21.42■■□□□ 1.02
NELFCD-211ENST00000492016 FAM83GA6ND36 823 aa21.41■■□□□ 1.02
NELFCD-211ENST00000492016 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
NELFCD-211ENST00000492016 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
NELFCD-211ENST00000492016 IP6K1Q92551 441 aa21.41■■□□□ 1.02
NELFCD-211ENST00000492016 BLMP54132 1417 aaPredicted RBP21.4■■□□□ 1.02
NELFCD-211ENST00000492016 FLT4P35916 1363 aa21.4■■□□□ 1.02
NELFCD-211ENST00000492016 AMPHP49418 695 aa21.4■■□□□ 1.02
NELFCD-211ENST00000492016 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
NELFCD-211ENST00000492016 FNBP4Q8N3X1 1017 aaPredicted RBP21.4■■□□□ 1.02
NELFCD-211ENST00000492016 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
NELFCD-211ENST00000492016 FBLN1P23142 703 aa21.39■■□□□ 1.01
NELFCD-211ENST00000492016 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
NELFCD-211ENST00000492016 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
NELFCD-211ENST00000492016 MYBBP1AQ9BQG0 1328 aaKnown RBP21.38■■□□□ 1.01
NELFCD-211ENST00000492016 HOXC9P31274 260 aa21.38■■□□□ 1.01
NELFCD-211ENST00000492016 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
NELFCD-211ENST00000492016 EMILIN1Q9Y6C2 1016 aa21.38■■□□□ 1.01
NELFCD-211ENST00000492016 SLIT2O94813 1529 aa21.38■■□□□ 1.01
NELFCD-211ENST00000492016 INSRP06213 1382 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms