RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 COL22A1Q8NFW1 1626 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF3-211ENST00000486829 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
ARHGEF3-211ENST00000486829 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF3-211ENST00000486829 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
ARHGEF3-211ENST00000486829 ACEP12821 1306 aa15.79■□□□□ 0.12
ARHGEF3-211ENST00000486829 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
ARHGEF3-211ENST00000486829 SLC12A5Q9H2X9 1139 aa15.79■□□□□ 0.12
ARHGEF3-211ENST00000486829 AKAP12Q02952 1782 aa15.78■□□□□ 0.12
ARHGEF3-211ENST00000486829 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
ARHGEF3-211ENST00000486829 A0A1W2PP64 1363 aa15.77■□□□□ 0.12
ARHGEF3-211ENST00000486829 MON2Q7Z3U7 1717 aa15.77■□□□□ 0.11
ARHGEF3-211ENST00000486829 USP6P35125 1406 aa15.77■□□□□ 0.11
ARHGEF3-211ENST00000486829 KTN1Q86UP2 1357 aaKnown RBP15.76■□□□□ 0.11
ARHGEF3-211ENST00000486829 PSME1Q06323 249 aa15.76■□□□□ 0.11
ARHGEF3-211ENST00000486829 KRT28Q7Z3Y7 464 aa15.76■□□□□ 0.11
ARHGEF3-211ENST00000486829 EDC4Q6P2E9 1401 aaKnown RBP15.75■□□□□ 0.11
ARHGEF3-211ENST00000486829 ADAMTS2O95450 1211 aa15.74■□□□□ 0.11
ARHGEF3-211ENST00000486829 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
ARHGEF3-211ENST00000486829 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
ARHGEF3-211ENST00000486829 SBNO1A3KN83 1393 aa15.74■□□□□ 0.11
ARHGEF3-211ENST00000486829 AFF2P51816 1311 aa15.73■□□□□ 0.11
ARHGEF3-211ENST00000486829 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
ARHGEF3-211ENST00000486829 ZNF772Q68DY9 489 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF3-211ENST00000486829 PANK3Q9H999 370 aa15.73■□□□□ 0.11
ARHGEF3-211ENST00000486829 NRKQ7Z2Y5 1582 aa15.73■□□□□ 0.11
ARHGEF3-211ENST00000486829 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
ARHGEF3-211ENST00000486829 TRPM3Q9HCF6 1732 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF3-211ENST00000486829 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
ARHGEF3-211ENST00000486829 TNS3Q68CZ2 1445 aa15.71■□□□□ 0.11
ARHGEF3-211ENST00000486829 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.11
ARHGEF3-211ENST00000486829 KNSTRNQ9Y448 316 aa15.7■□□□□ 0.1
ARHGEF3-211ENST00000486829 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
ARHGEF3-211ENST00000486829 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
ARHGEF3-211ENST00000486829 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
ARHGEF3-211ENST00000486829 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 ABCA3Q99758 1704 aa15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 ALS2Q96Q42 1657 aa15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 NSD2O96028 1365 aa15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
ARHGEF3-211ENST00000486829 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF3-211ENST00000486829 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
ARHGEF3-211ENST00000486829 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
ARHGEF3-211ENST00000486829 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF3-211ENST00000486829 CABLES1Q8TDN4 633 aa15.66■□□□□ 0.1
ARHGEF3-211ENST00000486829 KIF20BQ96Q89 1820 aa15.66■□□□□ 0.1
ARHGEF3-211ENST00000486829 USP54Q70EL1 1684 aa15.65■□□□□ 0.1
ARHGEF3-211ENST00000486829 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
ARHGEF3-211ENST00000486829 RXRBP28702 533 aa15.65■□□□□ 0.1
ARHGEF3-211ENST00000486829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.65■□□□□ 0.1
ARHGEF3-211ENST00000486829 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
ARHGEF3-211ENST00000486829 USP31Q70CQ4 1352 aa15.64■□□□□ 0.09
ARHGEF3-211ENST00000486829 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
ARHGEF3-211ENST00000486829 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF3-211ENST00000486829 QTRT2Q9H974 415 aaKnown RBP15.64■□□□□ 0.09
ARHGEF3-211ENST00000486829 USP21Q9UK80 565 aa15.64■□□□□ 0.09
ARHGEF3-211ENST00000486829 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
ARHGEF3-211ENST00000486829 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
ARHGEF3-211ENST00000486829 FYB1O15117 783 aa15.62■□□□□ 0.09
ARHGEF3-211ENST00000486829 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF3-211ENST00000486829 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF3-211ENST00000486829 OVOS2A0A0J9YW53 1432 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 OVOS2Q6IE36 1432 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 BCL9LQ86UU0 1499 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 ANKRD26Q9UPS8 1709 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 NLRP6P59044 892 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 NME9Q86XW9 330 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 COG3Q96JB2 828 aa15.61■□□□□ 0.09
ARHGEF3-211ENST00000486829 PLCH1Q4KWH8 1693 aa15.6■□□□□ 0.09
ARHGEF3-211ENST00000486829 CDK12Q9NYV4 1490 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF3-211ENST00000486829 RBM6P78332 1123 aaKnown RBP15.6■□□□□ 0.09
ARHGEF3-211ENST00000486829 USP19O94966 1318 aa15.6■□□□□ 0.09
ARHGEF3-211ENST00000486829 ATRNO75882 1429 aa15.6■□□□□ 0.09
ARHGEF3-211ENST00000486829 SLIT2O94813 1529 aa15.59■□□□□ 0.09
ARHGEF3-211ENST00000486829 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF3-211ENST00000486829 SLIT3O75094 1523 aa15.58■□□□□ 0.09
ARHGEF3-211ENST00000486829 KCNH5Q8NCM2 988 aa15.58■□□□□ 0.08
ARHGEF3-211ENST00000486829 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
ARHGEF3-211ENST00000486829 RGS12O14924 1447 aa15.58■□□□□ 0.08
ARHGEF3-211ENST00000486829 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
ARHGEF3-211ENST00000486829 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
ARHGEF3-211ENST00000486829 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
ARHGEF3-211ENST00000486829 MORC1Q86VD1 984 aa15.56■□□□□ 0.08
ARHGEF3-211ENST00000486829 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
ARHGEF3-211ENST00000486829 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
ARHGEF3-211ENST00000486829 UNC5CLQ8IV45 518 aa15.55■□□□□ 0.08
ARHGEF3-211ENST00000486829 COL14A1Q05707 1796 aaKnown RBP15.54■□□□□ 0.08
ARHGEF3-211ENST00000486829 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
ARHGEF3-211ENST00000486829 RALBP1Q15311 655 aa15.54■□□□□ 0.08
ARHGEF3-211ENST00000486829 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
ARHGEF3-211ENST00000486829 GLI3P10071 1580 aa15.53■□□□□ 0.08
ARHGEF3-211ENST00000486829 PARD3Q8TEW0 1356 aa15.53■□□□□ 0.08
ARHGEF3-211ENST00000486829 GCP02774 474 aa15.53■□□□□ 0.08
ARHGEF3-211ENST00000486829 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
ARHGEF3-211ENST00000486829 NFAT5O94916 1531 aa15.53■□□□□ 0.08
ARHGEF3-211ENST00000486829 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF3-211ENST00000486829 CPDO75976 1380 aa15.51■□□□□ 0.07
ARHGEF3-211ENST00000486829 ABCC6O95255 1503 aa15.51■□□□□ 0.07
ARHGEF3-211ENST00000486829 KIF24Q5T7B8 1368 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms