RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 CLTCL1P53675 1640 aa8.85□□□□□ -0.99
KDM4A-205ENST00000485249 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
KDM4A-205ENST00000485249 NPATQ14207 1427 aa8.85□□□□□ -0.99
KDM4A-205ENST00000485249 SYNMO15061 1565 aa8.85□□□□□ -0.99
KDM4A-205ENST00000485249 UGGT1Q9NYU2 1555 aa8.85□□□□□ -0.99
KDM4A-205ENST00000485249 C3P01024 1663 aa8.85□□□□□ -0.99
KDM4A-205ENST00000485249 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
KDM4A-205ENST00000485249 MAP3K7O43318 606 aa8.84□□□□□ -0.99
KDM4A-205ENST00000485249 FOSBP53539 338 aa8.84□□□□□ -0.99
KDM4A-205ENST00000485249 MLECQ14165 292 aa8.84□□□□□ -0.99
KDM4A-205ENST00000485249 SIN3AQ96ST3 1273 aa8.84□□□□□ -0.99
KDM4A-205ENST00000485249 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
KDM4A-205ENST00000485249 PIK3C2BO00750 1634 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 PTPRTO14522 1441 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 TRIM66O15016 1216 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 NUDT7P0C024 238 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 GPR153Q6NV75 609 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 CCDC102AQ96A19 550 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 TRPM2O94759 1503 aa8.83□□□□□ -1
KDM4A-205ENST00000485249 MYO5BQ9ULV0 1848 aa8.82□□□□□ -1
KDM4A-205ENST00000485249 ARHGAP31Q2M1Z3 1444 aa8.82□□□□□ -1
KDM4A-205ENST00000485249 ARSIQ5FYB1 569 aa8.82□□□□□ -1
KDM4A-205ENST00000485249 NOS1P29475 1434 aa8.81□□□□□ -1
KDM4A-205ENST00000485249 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
KDM4A-205ENST00000485249 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -1
KDM4A-205ENST00000485249 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
KDM4A-205ENST00000485249 KANK1Q14678 1352 aa8.81□□□□□ -1
KDM4A-205ENST00000485249 RPRD2Q5VT52 1461 aaKnown RBP8.81□□□□□ -1
KDM4A-205ENST00000485249 SPATA31D1Q6ZQQ2 1576 aa8.81□□□□□ -1
KDM4A-205ENST00000485249 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
KDM4A-205ENST00000485249 WASHC2CQ9Y4E1 1318 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 IRF6O14896 467 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 FECHP22830 423 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
KDM4A-205ENST00000485249 ZNF454Q8N9F8 522 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
KDM4A-205ENST00000485249 ERVK-7P63135 1459 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 ARID4BQ4LE39 1312 aaPredicted RBP8.8□□□□□ -1
KDM4A-205ENST00000485249 CLSPNQ9HAW4 1339 aa8.8□□□□□ -1
KDM4A-205ENST00000485249 SNPHO15079 494 aa8.79□□□□□ -1
KDM4A-205ENST00000485249 PDE4DQ08499 809 aa8.79□□□□□ -1
KDM4A-205ENST00000485249 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
KDM4A-205ENST00000485249 KIF1BO60333 1816 aa8.79□□□□□ -1
KDM4A-205ENST00000485249 IFT172Q9UG01 1749 aa8.79□□□□□ -1
KDM4A-205ENST00000485249 ZMYM3Q14202 1370 aa8.78□□□□□ -1
KDM4A-205ENST00000485249 AMHR2Q16671 573 aa8.78□□□□□ -1
KDM4A-205ENST00000485249 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
KDM4A-205ENST00000485249 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
KDM4A-205ENST00000485249 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1.01
KDM4A-205ENST00000485249 TMEM131LA2VDJ0 1609 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 ADGRB3O60242 1522 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
KDM4A-205ENST00000485249 CEBPAP49715 358 aaPredicted RBP8.76□□□□□ -1.01
KDM4A-205ENST00000485249 NEUROD1Q13562 356 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 CERKQ8TCT0 537 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 KDM4CQ9H3R0 1056 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 CNTLNQ9NXG0 1405 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 PPLO60437 1756 aa8.76□□□□□ -1.01
KDM4A-205ENST00000485249 NEURL4Q96JN8 1562 aa8.75□□□□□ -1.01
KDM4A-205ENST00000485249 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
KDM4A-205ENST00000485249 OTUD5Q96G74 571 aa8.75□□□□□ -1.01
KDM4A-205ENST00000485249 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
KDM4A-205ENST00000485249 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
KDM4A-205ENST00000485249 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
KDM4A-205ENST00000485249 CCDC144AA2RUR9 1427 aa8.74□□□□□ -1.01
KDM4A-205ENST00000485249 MYO3AQ8NEV4 1616 aa8.74□□□□□ -1.01
KDM4A-205ENST00000485249 HOXB1P14653 301 aaPredicted RBP8.74□□□□□ -1.01
KDM4A-205ENST00000485249 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
KDM4A-205ENST00000485249 PTPRMP28827 1452 aa8.73□□□□□ -1.01
KDM4A-205ENST00000485249 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
KDM4A-205ENST00000485249 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
KDM4A-205ENST00000485249 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
KDM4A-205ENST00000485249 NEXMIFQ5QGS0 1516 aa8.72□□□□□ -1.01
KDM4A-205ENST00000485249 IDI1Q13907 227 aa8.72□□□□□ -1.01
KDM4A-205ENST00000485249 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
KDM4A-205ENST00000485249 L3MBTL2Q969R5 705 aa8.72□□□□□ -1.01
KDM4A-205ENST00000485249 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
KDM4A-205ENST00000485249 ZNF142P52746 1687 aaPredicted RBP8.72□□□□□ -1.01
KDM4A-205ENST00000485249 TNRQ92752 1358 aa8.71□□□□□ -1.02
KDM4A-205ENST00000485249 A2ML1A8K2U0 1454 aa8.7□□□□□ -1.02
KDM4A-205ENST00000485249 NBPF8Q3BBV2 869 aa8.7□□□□□ -1.02
KDM4A-205ENST00000485249 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
KDM4A-205ENST00000485249 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
KDM4A-205ENST00000485249 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
KDM4A-205ENST00000485249 TRPM1Q7Z4N2 1603 aa8.69□□□□□ -1.02
KDM4A-205ENST00000485249 PPP1R15AO75807 674 aaPredicted RBP8.69□□□□□ -1.02
KDM4A-205ENST00000485249 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
KDM4A-205ENST00000485249 TONSLQ96HA7 1378 aa8.69□□□□□ -1.02
KDM4A-205ENST00000485249 CEP170BQ9Y4F5 1589 aaPredicted RBP8.69□□□□□ -1.02
KDM4A-205ENST00000485249 SETD1AO15047 1707 aaKnown RBP8.68□□□□□ -1.02
KDM4A-205ENST00000485249 RGL3Q3MIN7 710 aa8.68□□□□□ -1.02
KDM4A-205ENST00000485249 LHX8Q68G74 356 aa8.68□□□□□ -1.02
KDM4A-205ENST00000485249 ESF1Q9H501 851 aaKnown RBP8.68□□□□□ -1.02
KDM4A-205ENST00000485249 NRXN3Q9Y4C0 1643 aa8.68□□□□□ -1.02
KDM4A-205ENST00000485249 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
KDM4A-205ENST00000485249 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
KDM4A-205ENST00000485249 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
KDM4A-205ENST00000485249 MYOM2P54296 1465 aa8.67□□□□□ -1.02
KDM4A-205ENST00000485249 PRSS12P56730 875 aa8.67□□□□□ -1.02
KDM4A-205ENST00000485249 UHRF1BP1Q6BDS2 1440 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms