RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 PAK3O75914 559 aaPredicted RBP28.1■■■□□ 2.09
PKD1-218ENST00000485120 TTC21BQ7Z4L5 1316 aa28.1■■■□□ 2.09
PKD1-218ENST00000485120 ARHGEF10O15013 1369 aa28.09■■■□□ 2.09
PKD1-218ENST00000485120 CARD14Q9BXL6 1004 aa28.07■■■□□ 2.08
PKD1-218ENST00000485120 JCADQ9P266 1359 aa28.07■■■□□ 2.08
PKD1-218ENST00000485120 TNS3Q68CZ2 1445 aa28.07■■■□□ 2.08
PKD1-218ENST00000485120 PHLPP1O60346 1717 aa28.05■■■□□ 2.08
PKD1-218ENST00000485120 COL16A1Q07092 1604 aaPredicted RBP28.05■■■□□ 2.08
PKD1-218ENST00000485120 ABTB2Q8N961 1025 aa28.05■■■□□ 2.08
PKD1-218ENST00000485120 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
PKD1-218ENST00000485120 NLRP13Q86W25 1043 aa28.02■■■□□ 2.08
PKD1-218ENST00000485120 MYOM1P52179 1685 aa28.01■■■□□ 2.07
PKD1-218ENST00000485120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.01■■■□□ 2.07
PKD1-218ENST00000485120 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
PKD1-218ENST00000485120 PNPLA6Q8IY17 1366 aa28■■■□□ 2.07
PKD1-218ENST00000485120 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
PKD1-218ENST00000485120 AKAP12Q02952 1782 aa27.99■■■□□ 2.07
PKD1-218ENST00000485120 CGNL1Q0VF96 1302 aa27.99■■■□□ 2.07
PKD1-218ENST00000485120 SPATA31A6Q5VVP1 1343 aa27.99■■■□□ 2.07
PKD1-218ENST00000485120 NSD3Q9BZ95 1437 aa27.99■■■□□ 2.07
PKD1-218ENST00000485120 USP31Q70CQ4 1352 aa27.99■■■□□ 2.07
PKD1-218ENST00000485120 NLRP6P59044 892 aa27.98■■■□□ 2.07
PKD1-218ENST00000485120 TRPM3Q9HCF6 1732 aaPredicted RBP27.98■■■□□ 2.07
PKD1-218ENST00000485120 FYB1O15117 783 aa27.97■■■□□ 2.07
PKD1-218ENST00000485120 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
PKD1-218ENST00000485120 DDX10Q13206 875 aaKnown RBP27.94■■■□□ 2.06
PKD1-218ENST00000485120 NME9Q86XW9 330 aa27.94■■■□□ 2.06
PKD1-218ENST00000485120 USP19O94966 1318 aa27.92■■■□□ 2.06
PKD1-218ENST00000485120 NRKQ7Z2Y5 1582 aa27.92■■■□□ 2.06
PKD1-218ENST00000485120 NSD2O96028 1365 aa27.92■■■□□ 2.06
PKD1-218ENST00000485120 COG3Q96JB2 828 aa27.92■■■□□ 2.06
PKD1-218ENST00000485120 NPC1L1Q9UHC9 1359 aa27.91■■■□□ 2.06
PKD1-218ENST00000485120 KCNH5Q8NCM2 988 aa27.91■■■□□ 2.06
PKD1-218ENST00000485120 ALS2Q96Q42 1657 aa27.91■■■□□ 2.06
PKD1-218ENST00000485120 AMER1Q5JTC6 1135 aaPredicted RBP27.9■■■□□ 2.06
PKD1-218ENST00000485120 NUTM2GQ5VZR2 741 aa27.9■■■□□ 2.06
PKD1-218ENST00000485120 GCP02774 474 aa27.88■■■□□ 2.05
PKD1-218ENST00000485120 HAP1P54257 671 aaPredicted RBP27.87■■■□□ 2.05
PKD1-218ENST00000485120 GGNBP2Q9H3C7 697 aa27.87■■■□□ 2.05
PKD1-218ENST00000485120 COL22A1Q8NFW1 1626 aaPredicted RBP27.87■■■□□ 2.05
PKD1-218ENST00000485120 SHPRHQ149N8 1683 aa27.87■■■□□ 2.05
PKD1-218ENST00000485120 MED1Q15648 1581 aaPredicted RBP27.86■■■□□ 2.05
PKD1-218ENST00000485120 OVOS2A0A0J9YW53 1432 aa27.85■■■□□ 2.05
PKD1-218ENST00000485120 OVOS2Q6IE36 1432 aa27.85■■■□□ 2.05
PKD1-218ENST00000485120 CABLES1Q8TDN4 633 aa27.85■■■□□ 2.05
PKD1-218ENST00000485120 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
PKD1-218ENST00000485120 PIK3C2AO00443 1686 aa27.82■■■□□ 2.04
PKD1-218ENST00000485120 NUTM2BA6NNL0 878 aaPredicted RBP27.81■■■□□ 2.04
PKD1-218ENST00000485120 NUTM2EB1AL46 878 aaPredicted RBP27.81■■■□□ 2.04
PKD1-218ENST00000485120 NUTM2AQ8IVF1 878 aaPredicted RBP27.81■■■□□ 2.04
PKD1-218ENST00000485120 SLIT3O75094 1523 aa27.8■■■□□ 2.04
PKD1-218ENST00000485120 MORC1Q86VD1 984 aa27.79■■■□□ 2.04
PKD1-218ENST00000485120 CPDO75976 1380 aa27.78■■■□□ 2.04
PKD1-218ENST00000485120 USP54Q70EL1 1684 aa27.77■■■□□ 2.04
PKD1-218ENST00000485120 PLEKHG5O94827 1062 aa27.76■■■□□ 2.03
PKD1-218ENST00000485120 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
PKD1-218ENST00000485120 AATKQ6ZMQ8 1374 aa27.75■■■□□ 2.03
PKD1-218ENST00000485120 ADAMTS2O95450 1211 aa27.75■■■□□ 2.03
PKD1-218ENST00000485120 CC2D1BQ5T0F9 858 aaKnown RBP27.75■■■□□ 2.03
PKD1-218ENST00000485120 ZC3H6P61129 1189 aaKnown RBP27.74■■■□□ 2.03
PKD1-218ENST00000485120 MEX3CQ5U5Q3 659 aaKnown RBP27.73■■■□□ 2.03
PKD1-218ENST00000485120 PRDM11Q9NQV5 511 aa27.72■■■□□ 2.03
PKD1-218ENST00000485120 KIAA0232Q92628 1395 aa27.71■■■□□ 2.03
PKD1-218ENST00000485120 FAM83GA6ND36 823 aa27.7■■■□□ 2.02
PKD1-218ENST00000485120 SOX12O15370 315 aa27.7■■■□□ 2.02
PKD1-218ENST00000485120 KIF24Q5T7B8 1368 aa27.7■■■□□ 2.02
PKD1-218ENST00000485120 LRP6O75581 1613 aa27.7■■■□□ 2.02
PKD1-218ENST00000485120 RALBP1Q15311 655 aa27.69■■■□□ 2.02
PKD1-218ENST00000485120 NFAT5O94916 1531 aa27.68■■■□□ 2.02
PKD1-218ENST00000485120 FNBP4Q8N3X1 1017 aaPredicted RBP27.68■■■□□ 2.02
PKD1-218ENST00000485120 NGLY1Q96IV0 654 aa27.68■■■□□ 2.02
PKD1-218ENST00000485120 KIF20BQ96Q89 1820 aa27.68■■■□□ 2.02
PKD1-218ENST00000485120 CRYBG1Q9Y4K1 1723 aa27.67■■■□□ 2.02
PKD1-218ENST00000485120 PHRF1Q9P1Y6 1649 aaKnown RBP27.67■■■□□ 2.02
PKD1-218ENST00000485120 C8orf37Q96NL8 207 aa27.66■■■□□ 2.02
PKD1-218ENST00000485120 MAP3K19Q56UN5 1328 aa27.66■■■□□ 2.02
PKD1-218ENST00000485120 MARF1Q9Y4F3 1742 aaKnown RBP27.65■■■□□ 2.02
PKD1-218ENST00000485120 IP6K1Q92551 441 aa27.65■■■□□ 2.02
PKD1-218ENST00000485120 TNNT2P45379 298 aaPredicted RBP27.64■■■□□ 2.02
PKD1-218ENST00000485120 POLKQ9UBT6 870 aa27.64■■■□□ 2.02
PKD1-218ENST00000485120 FBLN1P23142 703 aa27.63■■■□□ 2.01
PKD1-218ENST00000485120 AMPHP49418 695 aa27.63■■■□□ 2.01
PKD1-218ENST00000485120 RRS1Q15050 365 aaKnown RBP27.63■■■□□ 2.01
PKD1-218ENST00000485120 ABCA3Q99758 1704 aa27.63■■■□□ 2.01
PKD1-218ENST00000485120 RTL1A6NKG5 1358 aa27.62■■■□□ 2.01
PKD1-218ENST00000485120 PARD3Q8TEW0 1356 aa27.62■■■□□ 2.01
PKD1-218ENST00000485120 CHRNA2Q15822 529 aa27.62■■■□□ 2.01
PKD1-218ENST00000485120 ABCC6O95255 1503 aa27.62■■■□□ 2.01
PKD1-218ENST00000485120 BTG4Q9NY30 223 aa27.6■■■□□ 2.01
PKD1-218ENST00000485120 ANKRD26Q9UPS8 1709 aa27.6■■■□□ 2.01
PKD1-218ENST00000485120 SLIT2O94813 1529 aa27.59■■■□□ 2.01
PKD1-218ENST00000485120 ZBTB7CA1YPR0 619 aa27.59■■■□□ 2.01
PKD1-218ENST00000485120 HOXC9P31274 260 aa27.59■■■□□ 2.01
PKD1-218ENST00000485120 CNGB1Q14028 1251 aaPredicted RBP27.59■■■□□ 2.01
PKD1-218ENST00000485120 PRKRIP1Q9H875 184 aaPredicted RBP27.59■■■□□ 2.01
PKD1-218ENST00000485120 ZNF772Q68DY9 489 aaPredicted RBP27.58■■■□□ 2.01
PKD1-218ENST00000485120 UNC5CLQ8IV45 518 aa27.58■■■□□ 2.01
PKD1-218ENST00000485120 EMILIN1Q9Y6C2 1016 aa27.58■■■□□ 2.01
PKD1-218ENST00000485120 FLT4P35916 1363 aa27.58■■■□□ 2.01
PKD1-218ENST00000485120 BLMP54132 1417 aaPredicted RBP27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms