RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
HLA-F-225ENST00000482257 COL22A1Q8NFW1 1626 aaPredicted RBP21.29■■□□□ 1
HLA-F-225ENST00000482257 MEX3CQ5U5Q3 659 aaKnown RBP21.28■■□□□ 1
HLA-F-225ENST00000482257 PANK3Q9H999 370 aa21.28■■□□□ 1
HLA-F-225ENST00000482257 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
HLA-F-225ENST00000482257 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
HLA-F-225ENST00000482257 ACEP12821 1306 aa21.27■□□□□ 0.99
HLA-F-225ENST00000482257 AKAP12Q02952 1782 aa21.26■□□□□ 0.99
HLA-F-225ENST00000482257 CPSF1Q10570 1443 aaKnown RBP21.25■□□□□ 0.99
HLA-F-225ENST00000482257 A0A1W2PP64 1363 aa21.24■□□□□ 0.99
HLA-F-225ENST00000482257 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
HLA-F-225ENST00000482257 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
HLA-F-225ENST00000482257 CD163L1Q9NR16 1453 aa21.23■□□□□ 0.99
HLA-F-225ENST00000482257 MON2Q7Z3U7 1717 aa21.22■□□□□ 0.99
HLA-F-225ENST00000482257 PSME1Q06323 249 aa21.22■□□□□ 0.99
HLA-F-225ENST00000482257 KNSTRNQ9Y448 316 aa21.22■□□□□ 0.99
HLA-F-225ENST00000482257 AFF2P51816 1311 aa21.21■□□□□ 0.99
HLA-F-225ENST00000482257 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
HLA-F-225ENST00000482257 C8orf37Q96NL8 207 aa21.2■□□□□ 0.98
HLA-F-225ENST00000482257 SPATA31A3Q5VYP0 1347 aa21.2■□□□□ 0.98
HLA-F-225ENST00000482257 USP6P35125 1406 aa21.2■□□□□ 0.98
HLA-F-225ENST00000482257 EDC4Q6P2E9 1401 aaKnown RBP21.2■□□□□ 0.98
HLA-F-225ENST00000482257 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
HLA-F-225ENST00000482257 ZNF772Q68DY9 489 aaPredicted RBP21.18■□□□□ 0.98
HLA-F-225ENST00000482257 NSD3Q9BZ95 1437 aa21.18■□□□□ 0.98
HLA-F-225ENST00000482257 CARD14Q9BXL6 1004 aa21.17■□□□□ 0.98
HLA-F-225ENST00000482257 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
HLA-F-225ENST00000482257 TNS3Q68CZ2 1445 aa21.17■□□□□ 0.98
HLA-F-225ENST00000482257 TRPM3Q9HCF6 1732 aaPredicted RBP21.16■□□□□ 0.98
HLA-F-225ENST00000482257 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
HLA-F-225ENST00000482257 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
HLA-F-225ENST00000482257 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
HLA-F-225ENST00000482257 TTC21BQ7Z4L5 1316 aa21.14■□□□□ 0.97
HLA-F-225ENST00000482257 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.97
HLA-F-225ENST00000482257 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.97
HLA-F-225ENST00000482257 NSD2O96028 1365 aa21.13■□□□□ 0.97
HLA-F-225ENST00000482257 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
HLA-F-225ENST00000482257 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
HLA-F-225ENST00000482257 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
HLA-F-225ENST00000482257 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
HLA-F-225ENST00000482257 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
HLA-F-225ENST00000482257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.12■□□□□ 0.97
HLA-F-225ENST00000482257 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
HLA-F-225ENST00000482257 NGLY1Q96IV0 654 aa21.11■□□□□ 0.97
HLA-F-225ENST00000482257 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
HLA-F-225ENST00000482257 AMER1Q5JTC6 1135 aaPredicted RBP21.09■□□□□ 0.97
HLA-F-225ENST00000482257 FNBP4Q8N3X1 1017 aaPredicted RBP21.09■□□□□ 0.97
HLA-F-225ENST00000482257 CABLES1Q8TDN4 633 aa21.09■□□□□ 0.97
HLA-F-225ENST00000482257 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
HLA-F-225ENST00000482257 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
HLA-F-225ENST00000482257 FYB1O15117 783 aa21.07■□□□□ 0.96
HLA-F-225ENST00000482257 RXRBP28702 533 aa21.07■□□□□ 0.96
HLA-F-225ENST00000482257 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
HLA-F-225ENST00000482257 ARHGEF10O15013 1369 aa21.06■□□□□ 0.96
HLA-F-225ENST00000482257 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
HLA-F-225ENST00000482257 RGS12O14924 1447 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 ATRNO75882 1429 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 ANP32CO43423 234 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
HLA-F-225ENST00000482257 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 NME9Q86XW9 330 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 COG3Q96JB2 828 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 USP21Q9UK80 565 aa21.05■□□□□ 0.96
HLA-F-225ENST00000482257 CDK12Q9NYV4 1490 aaPredicted RBP21.05■□□□□ 0.96
HLA-F-225ENST00000482257 CRYBG1Q9Y4K1 1723 aa21.04■□□□□ 0.96
HLA-F-225ENST00000482257 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
HLA-F-225ENST00000482257 USP31Q70CQ4 1352 aa21.04■□□□□ 0.96
HLA-F-225ENST00000482257 SLIT2O94813 1529 aa21.04■□□□□ 0.96
HLA-F-225ENST00000482257 PIK3C2AO00443 1686 aa21.03■□□□□ 0.96
HLA-F-225ENST00000482257 NLRP6P59044 892 aa21.03■□□□□ 0.96
HLA-F-225ENST00000482257 RALBP1Q15311 655 aa21.03■□□□□ 0.96
HLA-F-225ENST00000482257 MORC1Q86VD1 984 aa21.03■□□□□ 0.96
HLA-F-225ENST00000482257 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
HLA-F-225ENST00000482257 USP54Q70EL1 1684 aa21.02■□□□□ 0.95
HLA-F-225ENST00000482257 RBM6P78332 1123 aaKnown RBP21.01■□□□□ 0.95
HLA-F-225ENST00000482257 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.01■□□□□ 0.95
HLA-F-225ENST00000482257 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
HLA-F-225ENST00000482257 PLCH1Q4KWH8 1693 aa20.99■□□□□ 0.95
HLA-F-225ENST00000482257 OVOS2A0A0J9YW53 1432 aa20.99■□□□□ 0.95
HLA-F-225ENST00000482257 OVOS2Q6IE36 1432 aa20.99■□□□□ 0.95
HLA-F-225ENST00000482257 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
HLA-F-225ENST00000482257 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
HLA-F-225ENST00000482257 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
HLA-F-225ENST00000482257 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
HLA-F-225ENST00000482257 KCNH5Q8NCM2 988 aa20.96■□□□□ 0.95
HLA-F-225ENST00000482257 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
HLA-F-225ENST00000482257 GLI3P10071 1580 aa20.96■□□□□ 0.95
HLA-F-225ENST00000482257 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
HLA-F-225ENST00000482257 HAP1P54257 671 aaPredicted RBP20.95■□□□□ 0.94
HLA-F-225ENST00000482257 PHRF1Q9P1Y6 1649 aaKnown RBP20.95■□□□□ 0.94
HLA-F-225ENST00000482257 USP19O94966 1318 aa20.95■□□□□ 0.94
HLA-F-225ENST00000482257 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
HLA-F-225ENST00000482257 NWD2Q9ULI1 1742 aa20.94■□□□□ 0.94
HLA-F-225ENST00000482257 NRAPQ86VF7 1730 aa20.93■□□□□ 0.94
HLA-F-225ENST00000482257 SLIT3O75094 1523 aa20.93■□□□□ 0.94
HLA-F-225ENST00000482257 MYBBP1AQ9BQG0 1328 aaKnown RBP20.92■□□□□ 0.94
HLA-F-225ENST00000482257 AATKQ6ZMQ8 1374 aa20.92■□□□□ 0.94
HLA-F-225ENST00000482257 TNNT2P45379 298 aaPredicted RBP20.91■□□□□ 0.94
HLA-F-225ENST00000482257 GJD4Q96KN9 370 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms