RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP30-206ENST00000479219 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.66
USP30-206ENST00000479219 IL16Q14005 1332 aa10.9□□□□□ -0.66
USP30-206ENST00000479219 RIMS2Q9UQ26 1411 aa10.9□□□□□ -0.67
USP30-206ENST00000479219 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
USP30-206ENST00000479219 PMFBP1Q8TBY8 1022 aa10.89□□□□□ -0.67
USP30-206ENST00000479219 PNPLA6Q8IY17 1366 aa10.89□□□□□ -0.67
USP30-206ENST00000479219 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
USP30-206ENST00000479219 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
USP30-206ENST00000479219 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
USP30-206ENST00000479219 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
USP30-206ENST00000479219 SAFB2Q14151 953 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP30-206ENST00000479219 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
USP30-206ENST00000479219 FYB1O15117 783 aa10.87□□□□□ -0.67
USP30-206ENST00000479219 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
USP30-206ENST00000479219 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
USP30-206ENST00000479219 NRXN3Q9Y4C0 1643 aa10.87□□□□□ -0.67
USP30-206ENST00000479219 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
USP30-206ENST00000479219 FAM135BQ49AJ0 1406 aa10.86□□□□□ -0.67
USP30-206ENST00000479219 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
USP30-206ENST00000479219 PLEKHF1Q96S99 279 aa10.86□□□□□ -0.67
USP30-206ENST00000479219 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
USP30-206ENST00000479219 TECPR2O15040 1411 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
USP30-206ENST00000479219 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
USP30-206ENST00000479219 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 CPS1P31327 1500 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 ITSN1Q15811 1721 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 MON2Q7Z3U7 1717 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
USP30-206ENST00000479219 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
USP30-206ENST00000479219 FRAT1Q92837 279 aaPredicted RBP10.85□□□□□ -0.67
USP30-206ENST00000479219 MAP2P11137 1827 aaKnown RBP10.84□□□□□ -0.67
USP30-206ENST00000479219 U2SURPO15042 1029 aaKnown RBP10.84□□□□□ -0.67
USP30-206ENST00000479219 FCHSD2O94868 740 aa10.84□□□□□ -0.67
USP30-206ENST00000479219 ESF1Q9H501 851 aaKnown RBP10.84□□□□□ -0.67
USP30-206ENST00000479219 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
USP30-206ENST00000479219 AKAP12Q02952 1782 aa10.84□□□□□ -0.67
USP30-206ENST00000479219 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
USP30-206ENST00000479219 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
USP30-206ENST00000479219 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
USP30-206ENST00000479219 CDK12Q9NYV4 1490 aaPredicted RBP10.83□□□□□ -0.68
USP30-206ENST00000479219 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
USP30-206ENST00000479219 RWDD1Q9H446 243 aaPredicted RBP10.83□□□□□ -0.68
USP30-206ENST00000479219 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
USP30-206ENST00000479219 CABP1Q9NZU7 370 aa10.83□□□□□ -0.68
USP30-206ENST00000479219 LRRC7Q96NW7 1537 aa10.83□□□□□ -0.68
USP30-206ENST00000479219 CPSF1Q10570 1443 aaKnown RBP10.83□□□□□ -0.68
USP30-206ENST00000479219 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
USP30-206ENST00000479219 UBR1Q8IWV7 1749 aa10.82□□□□□ -0.68
USP30-206ENST00000479219 FTSJ3Q8IY81 847 aaKnown RBP10.82□□□□□ -0.68
USP30-206ENST00000479219 PPIP5K1Q6PFW1 1433 aa10.82□□□□□ -0.68
USP30-206ENST00000479219 RGS3P49796 1198 aa10.81□□□□□ -0.68
USP30-206ENST00000479219 MVPQ14764 893 aaKnown RBP10.81□□□□□ -0.68
USP30-206ENST00000479219 KIF16BQ96L93 1317 aa10.81□□□□□ -0.68
USP30-206ENST00000479219 IGHDP01880 384 aa10.81□□□□□ -0.68
USP30-206ENST00000479219 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
USP30-206ENST00000479219 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
USP30-206ENST00000479219 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
USP30-206ENST00000479219 IPO8O15397 1037 aaKnown RBP10.8□□□□□ -0.68
USP30-206ENST00000479219 C3P01024 1663 aa10.8□□□□□ -0.68
USP30-206ENST00000479219 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
USP30-206ENST00000479219 DDX19BQ9UMR2 479 aa10.8□□□□□ -0.68
USP30-206ENST00000479219 TNRQ92752 1358 aa10.8□□□□□ -0.68
USP30-206ENST00000479219 RIPK4P57078 832 aa10.79□□□□□ -0.68
USP30-206ENST00000479219 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
USP30-206ENST00000479219 SMC4Q9NTJ3 1288 aa10.79□□□□□ -0.68
USP30-206ENST00000479219 GSE1Q14687 1217 aa10.79□□□□□ -0.68
USP30-206ENST00000479219 SKAP1Q86WV1 359 aa10.79□□□□□ -0.68
USP30-206ENST00000479219 CHMP4BQ9H444 224 aaKnown RBP10.79□□□□□ -0.68
USP30-206ENST00000479219 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
USP30-206ENST00000479219 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
USP30-206ENST00000479219 TOPAZ1Q8N9V7 1692 aa10.78□□□□□ -0.68
USP30-206ENST00000479219 RLBP1P12271 317 aa10.78□□□□□ -0.68
USP30-206ENST00000479219 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
USP30-206ENST00000479219 ATF7IPQ6VMQ6 1270 aa10.78□□□□□ -0.68
USP30-206ENST00000479219 POLKQ9UBT6 870 aa10.78□□□□□ -0.68
USP30-206ENST00000479219 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.68
USP30-206ENST00000479219 METP08581 1390 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 BRPF1P55201 1214 aaPredicted RBP10.77□□□□□ -0.69
USP30-206ENST00000479219 WAPLQ7Z5K2 1190 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
USP30-206ENST00000479219 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.69
USP30-206ENST00000479219 TSR2Q969E8 191 aaKnown RBP10.77□□□□□ -0.69
USP30-206ENST00000479219 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
USP30-206ENST00000479219 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
USP30-206ENST00000479219 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
USP30-206ENST00000479219 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
USP30-206ENST00000479219 PCDHB15Q9Y5E8 787 aa10.76□□□□□ -0.69
USP30-206ENST00000479219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP30-206ENST00000479219 COG3Q96JB2 828 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 TRIM27P14373 513 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 MLECQ14165 292 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 NUDT16Q96DE0 195 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms