RNA–Protein interactions for RNA: ENST00000477023.1

MRPL38-207, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-207ENST00000477023 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
MRPL38-207ENST00000477023 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
MRPL38-207ENST00000477023 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
MRPL38-207ENST00000477023 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
MRPL38-207ENST00000477023 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
MRPL38-207ENST00000477023 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
MRPL38-207ENST00000477023 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
MRPL38-207ENST00000477023 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
MRPL38-207ENST00000477023 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
MRPL38-207ENST00000477023 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
MRPL38-207ENST00000477023 TECPR2O15040 1411 aa13.22□□□□□ -0.29
MRPL38-207ENST00000477023 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
MRPL38-207ENST00000477023 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
MRPL38-207ENST00000477023 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
MRPL38-207ENST00000477023 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
MRPL38-207ENST00000477023 POGKQ9P215 609 aa13.21□□□□□ -0.29
MRPL38-207ENST00000477023 PRAM1Q96QH2 718 aa13.2□□□□□ -0.3
MRPL38-207ENST00000477023 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
MRPL38-207ENST00000477023 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
MRPL38-207ENST00000477023 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
MRPL38-207ENST00000477023 FYB1O15117 783 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 CPS1P31327 1500 aa13.18□□□□□ -0.3
MRPL38-207ENST00000477023 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
MRPL38-207ENST00000477023 BCAR3O75815 825 aa13.17□□□□□ -0.3
MRPL38-207ENST00000477023 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
MRPL38-207ENST00000477023 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
MRPL38-207ENST00000477023 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
MRPL38-207ENST00000477023 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
MRPL38-207ENST00000477023 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
MRPL38-207ENST00000477023 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
MRPL38-207ENST00000477023 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
MRPL38-207ENST00000477023 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
MRPL38-207ENST00000477023 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
MRPL38-207ENST00000477023 FCHSD2O94868 740 aa13.15□□□□□ -0.3
MRPL38-207ENST00000477023 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
MRPL38-207ENST00000477023 STK26Q9P289 416 aa13.15□□□□□ -0.3
MRPL38-207ENST00000477023 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
MRPL38-207ENST00000477023 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
MRPL38-207ENST00000477023 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
MRPL38-207ENST00000477023 PPIP5K1Q6PFW1 1433 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 KIF13AQ9H1H9 1805 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
MRPL38-207ENST00000477023 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
MRPL38-207ENST00000477023 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
MRPL38-207ENST00000477023 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
MRPL38-207ENST00000477023 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
MRPL38-207ENST00000477023 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
MRPL38-207ENST00000477023 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
MRPL38-207ENST00000477023 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
MRPL38-207ENST00000477023 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
MRPL38-207ENST00000477023 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
MRPL38-207ENST00000477023 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
MRPL38-207ENST00000477023 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
MRPL38-207ENST00000477023 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
MRPL38-207ENST00000477023 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
MRPL38-207ENST00000477023 AKAP12Q02952 1782 aa13.1□□□□□ -0.31
MRPL38-207ENST00000477023 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
MRPL38-207ENST00000477023 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
MRPL38-207ENST00000477023 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
MRPL38-207ENST00000477023 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
MRPL38-207ENST00000477023 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
MRPL38-207ENST00000477023 TNRQ92752 1358 aa13.09□□□□□ -0.31
MRPL38-207ENST00000477023 NEFMP07197 916 aa13.09□□□□□ -0.31
MRPL38-207ENST00000477023 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
MRPL38-207ENST00000477023 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
MRPL38-207ENST00000477023 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
MRPL38-207ENST00000477023 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
MRPL38-207ENST00000477023 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
MRPL38-207ENST00000477023 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
MRPL38-207ENST00000477023 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
MRPL38-207ENST00000477023 MVPQ14764 893 aaKnown RBP13.08□□□□□ -0.32
MRPL38-207ENST00000477023 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.32
MRPL38-207ENST00000477023 CHMP4BQ9H444 224 aaKnown RBP13.08□□□□□ -0.32
MRPL38-207ENST00000477023 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
MRPL38-207ENST00000477023 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
MRPL38-207ENST00000477023 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
MRPL38-207ENST00000477023 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
MRPL38-207ENST00000477023 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
MRPL38-207ENST00000477023 IGHDP01880 384 aa13.07□□□□□ -0.32
MRPL38-207ENST00000477023 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
MRPL38-207ENST00000477023 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
MRPL38-207ENST00000477023 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
MRPL38-207ENST00000477023 C3P01024 1663 aa13.07□□□□□ -0.32
MRPL38-207ENST00000477023 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
MRPL38-207ENST00000477023 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 METP08581 1390 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
MRPL38-207ENST00000477023 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
MRPL38-207ENST00000477023 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
MRPL38-207ENST00000477023 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms