RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
APLF-204ENST00000471727 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
APLF-204ENST00000471727 TNRQ92752 1358 aa13.72□□□□□ -0.21
APLF-204ENST00000471727 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
APLF-204ENST00000471727 PLEKHF1Q96S99 279 aa13.72□□□□□ -0.21
APLF-204ENST00000471727 FCHSD2O94868 740 aa13.71□□□□□ -0.22
APLF-204ENST00000471727 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.22
APLF-204ENST00000471727 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
APLF-204ENST00000471727 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
APLF-204ENST00000471727 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
APLF-204ENST00000471727 NEFMP07197 916 aa13.7□□□□□ -0.22
APLF-204ENST00000471727 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
APLF-204ENST00000471727 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
APLF-204ENST00000471727 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
APLF-204ENST00000471727 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
APLF-204ENST00000471727 CPSF1Q10570 1443 aaKnown RBP13.69□□□□□ -0.22
APLF-204ENST00000471727 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 KIF13AQ9H1H9 1805 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
APLF-204ENST00000471727 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
APLF-204ENST00000471727 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
APLF-204ENST00000471727 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
APLF-204ENST00000471727 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
APLF-204ENST00000471727 KIF20BQ96Q89 1820 aa13.66□□□□□ -0.22
APLF-204ENST00000471727 CPS1P31327 1500 aa13.66□□□□□ -0.22
APLF-204ENST00000471727 METP08581 1390 aa13.66□□□□□ -0.22
APLF-204ENST00000471727 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
APLF-204ENST00000471727 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
APLF-204ENST00000471727 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
APLF-204ENST00000471727 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
APLF-204ENST00000471727 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
APLF-204ENST00000471727 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
APLF-204ENST00000471727 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
APLF-204ENST00000471727 RIPK4P57078 832 aa13.64□□□□□ -0.23
APLF-204ENST00000471727 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
APLF-204ENST00000471727 TXNDC2Q86VQ3 553 aa13.63□□□□□ -0.23
APLF-204ENST00000471727 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
APLF-204ENST00000471727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
APLF-204ENST00000471727 COG3Q96JB2 828 aa13.62□□□□□ -0.23
APLF-204ENST00000471727 RWDD1Q9H446 243 aaPredicted RBP13.62□□□□□ -0.23
APLF-204ENST00000471727 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
APLF-204ENST00000471727 DZIP1LQ8IYY4 767 aaKnown RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
APLF-204ENST00000471727 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
APLF-204ENST00000471727 MVPQ14764 893 aaKnown RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
APLF-204ENST00000471727 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
APLF-204ENST00000471727 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
APLF-204ENST00000471727 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
APLF-204ENST00000471727 IGHDP01880 384 aa13.6□□□□□ -0.23
APLF-204ENST00000471727 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
APLF-204ENST00000471727 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
APLF-204ENST00000471727 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
APLF-204ENST00000471727 ADAMTS13Q76LX8 1427 aa13.59□□□□□ -0.23
APLF-204ENST00000471727 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
APLF-204ENST00000471727 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
APLF-204ENST00000471727 IL13P35225 146 aa13.59□□□□□ -0.23
APLF-204ENST00000471727 CHMP4BQ9H444 224 aaKnown RBP13.59□□□□□ -0.23
APLF-204ENST00000471727 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
APLF-204ENST00000471727 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
APLF-204ENST00000471727 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
APLF-204ENST00000471727 C8orf34Q49A92 452 aa13.58□□□□□ -0.24
APLF-204ENST00000471727 RGS3P49796 1198 aa13.57□□□□□ -0.24
APLF-204ENST00000471727 GNAI1P63096 354 aa13.57□□□□□ -0.24
APLF-204ENST00000471727 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
APLF-204ENST00000471727 NME9Q86XW9 330 aa13.57□□□□□ -0.24
APLF-204ENST00000471727 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
APLF-204ENST00000471727 TBX22Q9Y458 520 aa13.57□□□□□ -0.24
APLF-204ENST00000471727 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
APLF-204ENST00000471727 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
APLF-204ENST00000471727 RLBP1P12271 317 aa13.56□□□□□ -0.24
APLF-204ENST00000471727 ADRA2BP18089 450 aa13.56□□□□□ -0.24
APLF-204ENST00000471727 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
APLF-204ENST00000471727 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
APLF-204ENST00000471727 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
APLF-204ENST00000471727 SLIT1O75093 1534 aa13.55□□□□□ -0.24
APLF-204ENST00000471727 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
APLF-204ENST00000471727 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
APLF-204ENST00000471727 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
APLF-204ENST00000471727 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
APLF-204ENST00000471727 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
APLF-204ENST00000471727 LTKP29376 864 aa13.53□□□□□ -0.24
APLF-204ENST00000471727 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
APLF-204ENST00000471727 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
APLF-204ENST00000471727 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
APLF-204ENST00000471727 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms