RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
SNED1-208ENST00000466618 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
SNED1-208ENST00000466618 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
SNED1-208ENST00000466618 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
SNED1-208ENST00000466618 ANKRD36BQ8N2N9 1353 aa20.43■□□□□ 0.86
SNED1-208ENST00000466618 PANK3Q9H999 370 aa20.43■□□□□ 0.86
SNED1-208ENST00000466618 PHF8Q9UPP1 1060 aa20.43■□□□□ 0.86
SNED1-208ENST00000466618 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
SNED1-208ENST00000466618 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
SNED1-208ENST00000466618 A0A1W2PP64 1363 aa20.42■□□□□ 0.86
SNED1-208ENST00000466618 ACEP12821 1306 aa20.41■□□□□ 0.86
SNED1-208ENST00000466618 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
SNED1-208ENST00000466618 SMG6Q86US8 1419 aaKnown RBP20.41■□□□□ 0.86
SNED1-208ENST00000466618 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
SNED1-208ENST00000466618 ITSN1Q15811 1721 aa20.41■□□□□ 0.86
SNED1-208ENST00000466618 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
SNED1-208ENST00000466618 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
SNED1-208ENST00000466618 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.41■□□□□ 0.86
SNED1-208ENST00000466618 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
SNED1-208ENST00000466618 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
SNED1-208ENST00000466618 UBE2Q2Q8WVN8 375 aa20.39■□□□□ 0.85
SNED1-208ENST00000466618 TOM1O60784 492 aa20.38■□□□□ 0.85
SNED1-208ENST00000466618 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
SNED1-208ENST00000466618 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
SNED1-208ENST00000466618 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
SNED1-208ENST00000466618 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
SNED1-208ENST00000466618 USP6P35125 1406 aa20.36■□□□□ 0.85
SNED1-208ENST00000466618 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
SNED1-208ENST00000466618 FOXO3O43524 673 aa20.35■□□□□ 0.85
SNED1-208ENST00000466618 KTN1Q86UP2 1357 aaKnown RBP20.35■□□□□ 0.85
SNED1-208ENST00000466618 UBAP1LF5GYI3 381 aa20.34■□□□□ 0.85
SNED1-208ENST00000466618 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.85
SNED1-208ENST00000466618 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
SNED1-208ENST00000466618 AKAP12Q02952 1782 aa20.32■□□□□ 0.84
SNED1-208ENST00000466618 USP35Q9P2H5 1018 aa20.32■□□□□ 0.84
SNED1-208ENST00000466618 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
SNED1-208ENST00000466618 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
SNED1-208ENST00000466618 NPHP3Q7Z494 1330 aa20.31■□□□□ 0.84
SNED1-208ENST00000466618 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
SNED1-208ENST00000466618 DDX17Q92841 729 aaKnown RBP20.31■□□□□ 0.84
SNED1-208ENST00000466618 PSME1Q06323 249 aa20.3■□□□□ 0.84
SNED1-208ENST00000466618 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
SNED1-208ENST00000466618 KNSTRNQ9Y448 316 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 PXDNQ92626 1479 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 NEFMP07197 916 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 KRT28Q7Z3Y7 464 aa20.29■□□□□ 0.84
SNED1-208ENST00000466618 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
SNED1-208ENST00000466618 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
SNED1-208ENST00000466618 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
SNED1-208ENST00000466618 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
SNED1-208ENST00000466618 PIP4K2BP78356 416 aa20.27■□□□□ 0.83
SNED1-208ENST00000466618 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
SNED1-208ENST00000466618 NHSL1Q5SYE7 1610 aa20.26■□□□□ 0.83
SNED1-208ENST00000466618 FYB1O15117 783 aa20.26■□□□□ 0.83
SNED1-208ENST00000466618 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
SNED1-208ENST00000466618 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
SNED1-208ENST00000466618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNED1-208ENST00000466618 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
SNED1-208ENST00000466618 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
SNED1-208ENST00000466618 NME9Q86XW9 330 aa20.23■□□□□ 0.83
SNED1-208ENST00000466618 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
SNED1-208ENST00000466618 NSD2O96028 1365 aa20.22■□□□□ 0.83
SNED1-208ENST00000466618 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
SNED1-208ENST00000466618 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
SNED1-208ENST00000466618 GGNBP2Q9H3C7 697 aa20.2■□□□□ 0.82
SNED1-208ENST00000466618 ZRANB1Q9UGI0 708 aa20.19■□□□□ 0.82
SNED1-208ENST00000466618 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
SNED1-208ENST00000466618 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
SNED1-208ENST00000466618 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
SNED1-208ENST00000466618 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
SNED1-208ENST00000466618 OVOS2A0A0J9YW53 1432 aa20.18■□□□□ 0.82
SNED1-208ENST00000466618 OVOS2Q6IE36 1432 aa20.18■□□□□ 0.82
SNED1-208ENST00000466618 PIK3C2AO00443 1686 aa20.18■□□□□ 0.82
SNED1-208ENST00000466618 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
SNED1-208ENST00000466618 ALS2Q96Q42 1657 aa20.17■□□□□ 0.82
SNED1-208ENST00000466618 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
SNED1-208ENST00000466618 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
SNED1-208ENST00000466618 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
SNED1-208ENST00000466618 PDE4AP27815 886 aa20.15■□□□□ 0.82
SNED1-208ENST00000466618 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
SNED1-208ENST00000466618 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
SNED1-208ENST00000466618 NLRP6P59044 892 aa20.15■□□□□ 0.82
SNED1-208ENST00000466618 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
SNED1-208ENST00000466618 COG3Q96JB2 828 aa20.14■□□□□ 0.81
SNED1-208ENST00000466618 KIF20BQ96Q89 1820 aa20.14■□□□□ 0.81
SNED1-208ENST00000466618 NUTM2GQ5VZR2 741 aa20.14■□□□□ 0.81
SNED1-208ENST00000466618 BACH2Q9BYV9 841 aa20.14■□□□□ 0.81
SNED1-208ENST00000466618 USP19O94966 1318 aa20.13■□□□□ 0.81
SNED1-208ENST00000466618 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
SNED1-208ENST00000466618 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
SNED1-208ENST00000466618 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
SNED1-208ENST00000466618 RALBP1Q15311 655 aa20.12■□□□□ 0.81
SNED1-208ENST00000466618 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
SNED1-208ENST00000466618 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
SNED1-208ENST00000466618 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
SNED1-208ENST00000466618 ANKRD26Q9UPS8 1709 aa20.1■□□□□ 0.81
SNED1-208ENST00000466618 MED1Q15648 1581 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms