RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
SEMA3D-203ENST00000463315 CABP1Q9NZU7 370 aa19.26■□□□□ 0.67
SEMA3D-203ENST00000463315 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
SEMA3D-203ENST00000463315 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
SEMA3D-203ENST00000463315 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
SEMA3D-203ENST00000463315 LRP6O75581 1613 aa19.25■□□□□ 0.67
SEMA3D-203ENST00000463315 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
SEMA3D-203ENST00000463315 TMF1P82094 1093 aa19.24■□□□□ 0.67
SEMA3D-203ENST00000463315 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
SEMA3D-203ENST00000463315 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
SEMA3D-203ENST00000463315 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-203ENST00000463315 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-203ENST00000463315 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
SEMA3D-203ENST00000463315 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-203ENST00000463315 USP6P35125 1406 aa19.2■□□□□ 0.66
SEMA3D-203ENST00000463315 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
SEMA3D-203ENST00000463315 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
SEMA3D-203ENST00000463315 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
SEMA3D-203ENST00000463315 ZNF772Q68DY9 489 aaPredicted RBP19.17■□□□□ 0.66
SEMA3D-203ENST00000463315 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
SEMA3D-203ENST00000463315 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
SEMA3D-203ENST00000463315 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
SEMA3D-203ENST00000463315 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
SEMA3D-203ENST00000463315 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
SEMA3D-203ENST00000463315 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 FNBP4Q8N3X1 1017 aaPredicted RBP19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
SEMA3D-203ENST00000463315 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
SEMA3D-203ENST00000463315 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
SEMA3D-203ENST00000463315 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
SEMA3D-203ENST00000463315 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
SEMA3D-203ENST00000463315 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
SEMA3D-203ENST00000463315 NGLY1Q96IV0 654 aa19.12■□□□□ 0.65
SEMA3D-203ENST00000463315 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
SEMA3D-203ENST00000463315 MARF1Q9Y4F3 1742 aaKnown RBP19.11■□□□□ 0.65
SEMA3D-203ENST00000463315 USP19O94966 1318 aa19.11■□□□□ 0.65
SEMA3D-203ENST00000463315 TTC21BQ7Z4L5 1316 aa19.11■□□□□ 0.65
SEMA3D-203ENST00000463315 EDC4Q6P2E9 1401 aaKnown RBP19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 ANKRD36BQ8N2N9 1353 aa19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 AFF2P51816 1311 aa19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 MON2Q7Z3U7 1717 aa19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 ABCA3Q99758 1704 aa19.1■□□□□ 0.65
SEMA3D-203ENST00000463315 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
SEMA3D-203ENST00000463315 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
SEMA3D-203ENST00000463315 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
SEMA3D-203ENST00000463315 SLIT2O94813 1529 aa19.06■□□□□ 0.64
SEMA3D-203ENST00000463315 NLRP6P59044 892 aa19.06■□□□□ 0.64
SEMA3D-203ENST00000463315 CPDO75976 1380 aa19.06■□□□□ 0.64
SEMA3D-203ENST00000463315 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
SEMA3D-203ENST00000463315 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
SEMA3D-203ENST00000463315 USP21Q9UK80 565 aa19.05■□□□□ 0.64
SEMA3D-203ENST00000463315 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
SEMA3D-203ENST00000463315 BCL9LQ86UU0 1499 aa19.04■□□□□ 0.64
SEMA3D-203ENST00000463315 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
SEMA3D-203ENST00000463315 GCP02774 474 aa19.04■□□□□ 0.64
SEMA3D-203ENST00000463315 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
SEMA3D-203ENST00000463315 SLIT3O75094 1523 aa19.04■□□□□ 0.64
SEMA3D-203ENST00000463315 FAM83GA6ND36 823 aa19.03■□□□□ 0.64
SEMA3D-203ENST00000463315 NUTM2GQ5VZR2 741 aa19.03■□□□□ 0.64
SEMA3D-203ENST00000463315 QTRT2Q9H974 415 aaKnown RBP19.03■□□□□ 0.64
SEMA3D-203ENST00000463315 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
SEMA3D-203ENST00000463315 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
SEMA3D-203ENST00000463315 USP54Q70EL1 1684 aa19.02■□□□□ 0.64
SEMA3D-203ENST00000463315 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
SEMA3D-203ENST00000463315 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
SEMA3D-203ENST00000463315 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.02■□□□□ 0.63
SEMA3D-203ENST00000463315 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
SEMA3D-203ENST00000463315 PRDM11Q9NQV5 511 aa19.01■□□□□ 0.63
SEMA3D-203ENST00000463315 ATRNO75882 1429 aa19■□□□□ 0.63
SEMA3D-203ENST00000463315 RXRBP28702 533 aa19■□□□□ 0.63
SEMA3D-203ENST00000463315 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
SEMA3D-203ENST00000463315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
SEMA3D-203ENST00000463315 KIAA0232Q92628 1395 aa19■□□□□ 0.63
SEMA3D-203ENST00000463315 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
SEMA3D-203ENST00000463315 MYOM1P52179 1685 aa19■□□□□ 0.63
SEMA3D-203ENST00000463315 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
SEMA3D-203ENST00000463315 ZC3H6P61129 1189 aaKnown RBP18.97■□□□□ 0.63
SEMA3D-203ENST00000463315 VPS72Q15906 364 aa18.97■□□□□ 0.63
SEMA3D-203ENST00000463315 NME9Q86XW9 330 aa18.97■□□□□ 0.63
SEMA3D-203ENST00000463315 PLCH1Q4KWH8 1693 aa18.97■□□□□ 0.63
SEMA3D-203ENST00000463315 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-203ENST00000463315 BTG4Q9NY30 223 aa18.96■□□□□ 0.63
SEMA3D-203ENST00000463315 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
SEMA3D-203ENST00000463315 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
SEMA3D-203ENST00000463315 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
SEMA3D-203ENST00000463315 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
SEMA3D-203ENST00000463315 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
SEMA3D-203ENST00000463315 GJD4Q96KN9 370 aaPredicted RBP18.95■□□□□ 0.62
SEMA3D-203ENST00000463315 COG3Q96JB2 828 aa18.94■□□□□ 0.62
SEMA3D-203ENST00000463315 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
SEMA3D-203ENST00000463315 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
SEMA3D-203ENST00000463315 NFAT5O94916 1531 aa18.94■□□□□ 0.62
SEMA3D-203ENST00000463315 ABCC6O95255 1503 aa18.94■□□□□ 0.62
SEMA3D-203ENST00000463315 FYB1O15117 783 aa18.93■□□□□ 0.62
SEMA3D-203ENST00000463315 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
SEMA3D-203ENST00000463315 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms