RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
DHFR2-203ENST00000461173 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
DHFR2-203ENST00000461173 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
DHFR2-203ENST00000461173 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
DHFR2-203ENST00000461173 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
DHFR2-203ENST00000461173 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
DHFR2-203ENST00000461173 ADRA2BP18089 450 aa12.72□□□□□ -0.37
DHFR2-203ENST00000461173 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
DHFR2-203ENST00000461173 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
DHFR2-203ENST00000461173 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
DHFR2-203ENST00000461173 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
DHFR2-203ENST00000461173 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
DHFR2-203ENST00000461173 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.38
DHFR2-203ENST00000461173 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.38
DHFR2-203ENST00000461173 FCHSD2O94868 740 aa12.71□□□□□ -0.38
DHFR2-203ENST00000461173 CABP1Q9NZU7 370 aa12.71□□□□□ -0.38
DHFR2-203ENST00000461173 CPS1P31327 1500 aa12.7□□□□□ -0.38
DHFR2-203ENST00000461173 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
DHFR2-203ENST00000461173 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
DHFR2-203ENST00000461173 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
DHFR2-203ENST00000461173 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
DHFR2-203ENST00000461173 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
DHFR2-203ENST00000461173 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
DHFR2-203ENST00000461173 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
DHFR2-203ENST00000461173 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
DHFR2-203ENST00000461173 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
DHFR2-203ENST00000461173 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
DHFR2-203ENST00000461173 TNRQ92752 1358 aa12.68□□□□□ -0.38
DHFR2-203ENST00000461173 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
DHFR2-203ENST00000461173 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
DHFR2-203ENST00000461173 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
DHFR2-203ENST00000461173 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
DHFR2-203ENST00000461173 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
DHFR2-203ENST00000461173 TMEM2Q9UHN6 1383 aa12.66□□□□□ -0.38
DHFR2-203ENST00000461173 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
DHFR2-203ENST00000461173 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
DHFR2-203ENST00000461173 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
DHFR2-203ENST00000461173 METP08581 1390 aa12.66□□□□□ -0.38
DHFR2-203ENST00000461173 IGHDP01880 384 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 WAPLQ7Z5K2 1190 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 USP35Q9P2H5 1018 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
DHFR2-203ENST00000461173 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.39
DHFR2-203ENST00000461173 MVPQ14764 893 aaKnown RBP12.65□□□□□ -0.39
DHFR2-203ENST00000461173 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
DHFR2-203ENST00000461173 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
DHFR2-203ENST00000461173 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
DHFR2-203ENST00000461173 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
DHFR2-203ENST00000461173 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
DHFR2-203ENST00000461173 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
DHFR2-203ENST00000461173 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
DHFR2-203ENST00000461173 NEFMP07197 916 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 RLBP1P12271 317 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 RIPK4P57078 832 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 DZIP1LQ8IYY4 767 aaKnown RBP12.63□□□□□ -0.39
DHFR2-203ENST00000461173 AKAP12Q02952 1782 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
DHFR2-203ENST00000461173 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
DHFR2-203ENST00000461173 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
DHFR2-203ENST00000461173 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
DHFR2-203ENST00000461173 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
DHFR2-203ENST00000461173 ADAMTS13Q76LX8 1427 aa12.61□□□□□ -0.39
DHFR2-203ENST00000461173 C3P01024 1663 aa12.61□□□□□ -0.39
DHFR2-203ENST00000461173 MAP2P11137 1827 aaKnown RBP12.61□□□□□ -0.39
DHFR2-203ENST00000461173 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
DHFR2-203ENST00000461173 MLECQ14165 292 aa12.61□□□□□ -0.39
DHFR2-203ENST00000461173 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
DHFR2-203ENST00000461173 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
DHFR2-203ENST00000461173 IL13P35225 146 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
DHFR2-203ENST00000461173 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
DHFR2-203ENST00000461173 ARXQ96QS3 562 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 RGS3P49796 1198 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
DHFR2-203ENST00000461173 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
DHFR2-203ENST00000461173 COG3Q96JB2 828 aa12.59□□□□□ -0.39
DHFR2-203ENST00000461173 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
DHFR2-203ENST00000461173 ITSN1Q15811 1721 aa12.58□□□□□ -0.39
DHFR2-203ENST00000461173 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 TRIM27P14373 513 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
DHFR2-203ENST00000461173 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
DHFR2-203ENST00000461173 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
DHFR2-203ENST00000461173 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 SLIT1O75093 1534 aa12.58□□□□□ -0.4
DHFR2-203ENST00000461173 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
DHFR2-203ENST00000461173 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
DHFR2-203ENST00000461173 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
DHFR2-203ENST00000461173 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms