RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
SMNDC1-203ENST00000460483 SLC12A5Q9H2X9 1139 aa15.13■□□□□ 0.01
SMNDC1-203ENST00000460483 ACEP12821 1306 aa15.13■□□□□ 0.01
SMNDC1-203ENST00000460483 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
SMNDC1-203ENST00000460483 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
SMNDC1-203ENST00000460483 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
SMNDC1-203ENST00000460483 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
SMNDC1-203ENST00000460483 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
SMNDC1-203ENST00000460483 FMN2Q9NZ56 1722 aa15.11■□□□□ 0.01
SMNDC1-203ENST00000460483 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
SMNDC1-203ENST00000460483 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
SMNDC1-203ENST00000460483 FBXO41Q8TF61 875 aa15.1■□□□□ 0.01
SMNDC1-203ENST00000460483 C11orf95C9JLR9 678 aaPredicted RBP15.09■□□□□ 0.01
SMNDC1-203ENST00000460483 TTC21AQ8NDW8 1320 aa15.09■□□□□ 0.01
SMNDC1-203ENST00000460483 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
SMNDC1-203ENST00000460483 PANK3Q9H999 370 aa15.08■□□□□ 0
SMNDC1-203ENST00000460483 KIF1AQ12756 1690 aa15.08■□□□□ 0
SMNDC1-203ENST00000460483 CGNL1Q0VF96 1302 aa15.08■□□□□ 0
SMNDC1-203ENST00000460483 ITSN1Q15811 1721 aa15.07■□□□□ 0
SMNDC1-203ENST00000460483 PITPNM1O00562 1244 aa15.07■□□□□ 0
SMNDC1-203ENST00000460483 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
SMNDC1-203ENST00000460483 SBNO1A3KN83 1393 aa15.07■□□□□ 0
SMNDC1-203ENST00000460483 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
SMNDC1-203ENST00000460483 ARHGEF10O15013 1369 aa15.06■□□□□ 0
SMNDC1-203ENST00000460483 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
SMNDC1-203ENST00000460483 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
SMNDC1-203ENST00000460483 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
SMNDC1-203ENST00000460483 NLRP13Q86W25 1043 aa15.05■□□□□ -0
SMNDC1-203ENST00000460483 A0A1W2PP64 1363 aa15.05■□□□□ -0
SMNDC1-203ENST00000460483 USP6P35125 1406 aa15.05■□□□□ -0
SMNDC1-203ENST00000460483 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
SMNDC1-203ENST00000460483 ABTB2Q8N961 1025 aa15.04■□□□□ -0
SMNDC1-203ENST00000460483 TTC21BQ7Z4L5 1316 aa15.03■□□□□ -0
SMNDC1-203ENST00000460483 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
SMNDC1-203ENST00000460483 NSD2O96028 1365 aa15.02■□□□□ -0
SMNDC1-203ENST00000460483 SPATA31A3Q5VYP0 1347 aa15.02■□□□□ -0
SMNDC1-203ENST00000460483 HAP1P54257 671 aaPredicted RBP15.02■□□□□ -0
SMNDC1-203ENST00000460483 COG3Q96JB2 828 aa15.02■□□□□ -0
SMNDC1-203ENST00000460483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMNDC1-203ENST00000460483 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
SMNDC1-203ENST00000460483 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
SMNDC1-203ENST00000460483 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
SMNDC1-203ENST00000460483 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 SPDYE6P0CI01 402 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 NLRP6P59044 892 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
SMNDC1-203ENST00000460483 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 ROBO1Q9Y6N7 1651 aa15□□□□□ -0.01
SMNDC1-203ENST00000460483 JCADQ9P266 1359 aa14.98□□□□□ -0.01
SMNDC1-203ENST00000460483 CD163L1Q9NR16 1453 aa14.98□□□□□ -0.01
SMNDC1-203ENST00000460483 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
SMNDC1-203ENST00000460483 PXDNQ92626 1479 aa14.97□□□□□ -0.01
SMNDC1-203ENST00000460483 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
SMNDC1-203ENST00000460483 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
SMNDC1-203ENST00000460483 SSH2Q76I76 1423 aa14.97□□□□□ -0.01
SMNDC1-203ENST00000460483 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.01
SMNDC1-203ENST00000460483 FYB1O15117 783 aa14.96□□□□□ -0.01
SMNDC1-203ENST00000460483 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
SMNDC1-203ENST00000460483 HSPA1LP34931 641 aa14.96□□□□□ -0.01
SMNDC1-203ENST00000460483 USP31Q70CQ4 1352 aa14.96□□□□□ -0.02
SMNDC1-203ENST00000460483 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
SMNDC1-203ENST00000460483 RALBP1Q15311 655 aa14.94□□□□□ -0.02
SMNDC1-203ENST00000460483 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
SMNDC1-203ENST00000460483 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
SMNDC1-203ENST00000460483 ANP32CO43423 234 aa14.93□□□□□ -0.02
SMNDC1-203ENST00000460483 NME9Q86XW9 330 aa14.93□□□□□ -0.02
SMNDC1-203ENST00000460483 GGNBP2Q9H3C7 697 aa14.93□□□□□ -0.02
SMNDC1-203ENST00000460483 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMNDC1-203ENST00000460483 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
SMNDC1-203ENST00000460483 HAX1O00165 279 aa14.91□□□□□ -0.02
SMNDC1-203ENST00000460483 GCP02774 474 aa14.91□□□□□ -0.02
SMNDC1-203ENST00000460483 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
SMNDC1-203ENST00000460483 PNPLA6Q8IY17 1366 aa14.9□□□□□ -0.02
SMNDC1-203ENST00000460483 NUTM2GQ5VZR2 741 aa14.9□□□□□ -0.02
SMNDC1-203ENST00000460483 MYOM1P52179 1685 aa14.9□□□□□ -0.02
SMNDC1-203ENST00000460483 USP19O94966 1318 aa14.9□□□□□ -0.02
SMNDC1-203ENST00000460483 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
SMNDC1-203ENST00000460483 RGPD8O14715 1765 aaPredicted RBP14.89□□□□□ -0.03
SMNDC1-203ENST00000460483 KIF24Q5T7B8 1368 aa14.88□□□□□ -0.03
SMNDC1-203ENST00000460483 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
SMNDC1-203ENST00000460483 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
SMNDC1-203ENST00000460483 MON2Q7Z3U7 1717 aa14.88□□□□□ -0.03
SMNDC1-203ENST00000460483 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
SMNDC1-203ENST00000460483 AATKQ6ZMQ8 1374 aa14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 OVOS2A0A0J9YW53 1432 aa14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 OVOS2Q6IE36 1432 aa14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 COL16A1Q07092 1604 aaPredicted RBP14.87□□□□□ -0.03
SMNDC1-203ENST00000460483 NUTM2BA6NNL0 878 aaPredicted RBP14.86□□□□□ -0.03
SMNDC1-203ENST00000460483 NUTM2EB1AL46 878 aaPredicted RBP14.86□□□□□ -0.03
SMNDC1-203ENST00000460483 AMPHP49418 695 aa14.86□□□□□ -0.03
SMNDC1-203ENST00000460483 NUTM2AQ8IVF1 878 aaPredicted RBP14.86□□□□□ -0.03
SMNDC1-203ENST00000460483 PRDM11Q9NQV5 511 aa14.86□□□□□ -0.03
SMNDC1-203ENST00000460483 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
SMNDC1-203ENST00000460483 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
SMNDC1-203ENST00000460483 CPDO75976 1380 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms