RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
MBD1-210ENST00000457839 ADGRB2O60241 1585 aa21.56■■□□□ 1.04
MBD1-210ENST00000457839 DIP2AQ14689 1571 aa21.56■■□□□ 1.04
MBD1-210ENST00000457839 ANKRD26Q9UPS8 1709 aa21.56■■□□□ 1.04
MBD1-210ENST00000457839 PRKCSHP14314 528 aaPredicted RBP21.55■■□□□ 1.04
MBD1-210ENST00000457839 POLKQ9UBT6 870 aa21.55■■□□□ 1.04
MBD1-210ENST00000457839 NKTRP30414 1462 aaKnown RBP21.54■■□□□ 1.04
MBD1-210ENST00000457839 ZNF142P52746 1687 aaPredicted RBP21.54■■□□□ 1.04
MBD1-210ENST00000457839 TCP11L2Q8N4U5 519 aa21.54■■□□□ 1.04
MBD1-210ENST00000457839 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
MBD1-210ENST00000457839 DUSP27Q5VZP5 1158 aa21.54■■□□□ 1.04
MBD1-210ENST00000457839 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
MBD1-210ENST00000457839 EMILIN1Q9Y6C2 1016 aa21.54■■□□□ 1.04
MBD1-210ENST00000457839 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
MBD1-210ENST00000457839 PLEKHG3A1L390 1219 aa21.52■■□□□ 1.04
MBD1-210ENST00000457839 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
MBD1-210ENST00000457839 COG3Q96JB2 828 aa21.52■■□□□ 1.04
MBD1-210ENST00000457839 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
MBD1-210ENST00000457839 PLIN1O60240 522 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
MBD1-210ENST00000457839 SLFN5Q08AF3 891 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 B4GALNT3Q6L9W6 998 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 WWC1Q8IX03 1113 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 TTC21BQ7Z4L5 1316 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 MON2Q7Z3U7 1717 aa21.5■■□□□ 1.03
MBD1-210ENST00000457839 DIAPH1O60610 1272 aaKnown RBP21.5■■□□□ 1.03
MBD1-210ENST00000457839 ITSN1Q15811 1721 aa21.49■■□□□ 1.03
MBD1-210ENST00000457839 PIK3R4Q99570 1358 aa21.49■■□□□ 1.03
MBD1-210ENST00000457839 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
MBD1-210ENST00000457839 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
MBD1-210ENST00000457839 SOX12O15370 315 aa21.48■■□□□ 1.03
MBD1-210ENST00000457839 NGDNQ8NEJ9 315 aaKnown RBP21.48■■□□□ 1.03
MBD1-210ENST00000457839 RGPD8O14715 1765 aaPredicted RBP21.48■■□□□ 1.03
MBD1-210ENST00000457839 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
MBD1-210ENST00000457839 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
MBD1-210ENST00000457839 ERICH6BQ5W0A0 696 aa21.47■■□□□ 1.03
MBD1-210ENST00000457839 NPHP4O75161 1426 aaPredicted RBP21.47■■□□□ 1.03
MBD1-210ENST00000457839 USP6P35125 1406 aa21.47■■□□□ 1.03
MBD1-210ENST00000457839 MAP2P11137 1827 aaKnown RBP21.46■■□□□ 1.03
MBD1-210ENST00000457839 IQSEC2Q5JU85 1478 aa21.44■■□□□ 1.02
MBD1-210ENST00000457839 TRMT2AQ8IZ69 625 aaKnown RBP21.44■■□□□ 1.02
MBD1-210ENST00000457839 PLEKHF1Q96S99 279 aa21.44■■□□□ 1.02
MBD1-210ENST00000457839 CHD2O14647 1828 aaKnown RBP21.44■■□□□ 1.02
MBD1-210ENST00000457839 HMOX1P09601 288 aa21.42■■□□□ 1.02
MBD1-210ENST00000457839 E9PSI1 815 aa21.41■■□□□ 1.02
MBD1-210ENST00000457839 C14orf37Q86TY3 774 aa21.41■■□□□ 1.02
MBD1-210ENST00000457839 NUTM2GQ5VZR2 741 aa21.4■■□□□ 1.02
MBD1-210ENST00000457839 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
MBD1-210ENST00000457839 EXOC6Q8TAG9 804 aa21.4■■□□□ 1.02
MBD1-210ENST00000457839 NRKQ7Z2Y5 1582 aa21.4■■□□□ 1.02
MBD1-210ENST00000457839 HSPA2P54652 639 aa21.39■■□□□ 1.02
MBD1-210ENST00000457839 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.02
MBD1-210ENST00000457839 AATKQ6ZMQ8 1374 aa21.39■■□□□ 1.01
MBD1-210ENST00000457839 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
MBD1-210ENST00000457839 SSH2Q76I76 1423 aa21.39■■□□□ 1.01
MBD1-210ENST00000457839 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
MBD1-210ENST00000457839 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
MBD1-210ENST00000457839 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
MBD1-210ENST00000457839 IL13P35225 146 aa21.37■■□□□ 1.01
MBD1-210ENST00000457839 C20orf194Q5TEA3 1177 aa21.37■■□□□ 1.01
MBD1-210ENST00000457839 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
MBD1-210ENST00000457839 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
MBD1-210ENST00000457839 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
MBD1-210ENST00000457839 RSPH6AQ9H0K4 717 aa21.36■■□□□ 1.01
MBD1-210ENST00000457839 PHACTR3Q96KR7 559 aa21.35■■□□□ 1.01
MBD1-210ENST00000457839 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
MBD1-210ENST00000457839 BCAR3O75815 825 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 FCHSD2O94868 740 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 TRIM35Q9UPQ4 493 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 ANKARQ7Z5J8 1434 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
MBD1-210ENST00000457839 RIPK4P57078 832 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 ESCO1Q5FWF5 840 aa21.34■■□□□ 1.01
MBD1-210ENST00000457839 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1.01
MBD1-210ENST00000457839 WDR63Q8IWG1 891 aa21.33■■□□□ 1.01
MBD1-210ENST00000457839 CCDC136Q96JN2 1154 aa21.33■■□□□ 1.01
MBD1-210ENST00000457839 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
MBD1-210ENST00000457839 NLRP6P59044 892 aa21.33■■□□□ 1
MBD1-210ENST00000457839 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1
MBD1-210ENST00000457839 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
MBD1-210ENST00000457839 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
MBD1-210ENST00000457839 ADGRL3Q9HAR2 1447 aa21.32■■□□□ 1
MBD1-210ENST00000457839 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
MBD1-210ENST00000457839 ABTB2Q8N961 1025 aa21.3■■□□□ 1
MBD1-210ENST00000457839 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
MBD1-210ENST00000457839 ORAI2Q96SN7 254 aa21.3■■□□□ 1
MBD1-210ENST00000457839 CRBNQ96SW2 442 aa21.3■■□□□ 1
MBD1-210ENST00000457839 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
MBD1-210ENST00000457839 KDM4FA0A1W2PPD8 638 aa21.29■■□□□ 1
MBD1-210ENST00000457839 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
MBD1-210ENST00000457839 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
MBD1-210ENST00000457839 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
MBD1-210ENST00000457839 USP31Q70CQ4 1352 aa21.29■■□□□ 1
MBD1-210ENST00000457839 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
MBD1-210ENST00000457839 PLEKHG5O94827 1062 aa21.28■■□□□ 1
MBD1-210ENST00000457839 PIK3C2AO00443 1686 aa21.27■■□□□ 1
MBD1-210ENST00000457839 NEFMP07197 916 aa21.26■□□□□ 0.99
MBD1-210ENST00000457839 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
MBD1-210ENST00000457839 FOXO3O43524 673 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms