RNA–Protein interactions for RNA: ENST00000454994.3

AL139260.3-202, humanhuman

TSL 2

Gene AL139260.3, Length 2,381 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-202ENST00000454994 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
AL139260.3-202ENST00000454994 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
AL139260.3-202ENST00000454994 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 ZMYM3Q14202 1370 aa17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
AL139260.3-202ENST00000454994 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
AL139260.3-202ENST00000454994 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
AL139260.3-202ENST00000454994 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
AL139260.3-202ENST00000454994 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
AL139260.3-202ENST00000454994 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
AL139260.3-202ENST00000454994 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
AL139260.3-202ENST00000454994 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
AL139260.3-202ENST00000454994 USP19O94966 1318 aa17.42■□□□□ 0.38
AL139260.3-202ENST00000454994 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
AL139260.3-202ENST00000454994 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
AL139260.3-202ENST00000454994 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
AL139260.3-202ENST00000454994 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
AL139260.3-202ENST00000454994 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
AL139260.3-202ENST00000454994 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
AL139260.3-202ENST00000454994 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
AL139260.3-202ENST00000454994 MED14O60244 1454 aa17.39■□□□□ 0.37
AL139260.3-202ENST00000454994 KNDC1Q76NI1 1749 aa17.39■□□□□ 0.37
AL139260.3-202ENST00000454994 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.37
AL139260.3-202ENST00000454994 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
AL139260.3-202ENST00000454994 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
AL139260.3-202ENST00000454994 MAPK8IP3Q9UPT6 1336 aa17.38■□□□□ 0.37
AL139260.3-202ENST00000454994 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
AL139260.3-202ENST00000454994 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
AL139260.3-202ENST00000454994 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
AL139260.3-202ENST00000454994 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
AL139260.3-202ENST00000454994 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
AL139260.3-202ENST00000454994 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
AL139260.3-202ENST00000454994 RIPK4P57078 832 aa17.37■□□□□ 0.37
AL139260.3-202ENST00000454994 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
AL139260.3-202ENST00000454994 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
AL139260.3-202ENST00000454994 TNRQ92752 1358 aa17.36■□□□□ 0.37
AL139260.3-202ENST00000454994 TRIM27P14373 513 aa17.36■□□□□ 0.37
AL139260.3-202ENST00000454994 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
AL139260.3-202ENST00000454994 HMOX1P09601 288 aa17.35■□□□□ 0.37
AL139260.3-202ENST00000454994 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
AL139260.3-202ENST00000454994 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
AL139260.3-202ENST00000454994 DZIP1LQ8IYY4 767 aaKnown RBP17.35■□□□□ 0.37
AL139260.3-202ENST00000454994 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
AL139260.3-202ENST00000454994 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
AL139260.3-202ENST00000454994 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
AL139260.3-202ENST00000454994 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.37
AL139260.3-202ENST00000454994 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.37
AL139260.3-202ENST00000454994 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
AL139260.3-202ENST00000454994 ATP7BP35670 1465 aa17.33■□□□□ 0.36
AL139260.3-202ENST00000454994 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
AL139260.3-202ENST00000454994 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
AL139260.3-202ENST00000454994 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
AL139260.3-202ENST00000454994 METP08581 1390 aa17.31■□□□□ 0.36
AL139260.3-202ENST00000454994 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
AL139260.3-202ENST00000454994 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
AL139260.3-202ENST00000454994 TECPR2O15040 1411 aa17.31■□□□□ 0.36
AL139260.3-202ENST00000454994 CPS1P31327 1500 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 NME9Q86XW9 330 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
AL139260.3-202ENST00000454994 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
AL139260.3-202ENST00000454994 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
AL139260.3-202ENST00000454994 TXNDC2Q86VQ3 553 aa17.29■□□□□ 0.36
AL139260.3-202ENST00000454994 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
AL139260.3-202ENST00000454994 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
AL139260.3-202ENST00000454994 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
AL139260.3-202ENST00000454994 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
AL139260.3-202ENST00000454994 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
AL139260.3-202ENST00000454994 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.35
AL139260.3-202ENST00000454994 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 C3P01024 1663 aa17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 MON2Q7Z3U7 1717 aa17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 AKAP12Q02952 1782 aa17.26■□□□□ 0.35
AL139260.3-202ENST00000454994 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
AL139260.3-202ENST00000454994 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 FER1L4A9Z1Z3 1794 aa17.24■□□□□ 0.35
AL139260.3-202ENST00000454994 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
AL139260.3-202ENST00000454994 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
AL139260.3-202ENST00000454994 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
AL139260.3-202ENST00000454994 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
AL139260.3-202ENST00000454994 EDC4Q6P2E9 1401 aaKnown RBP17.22■□□□□ 0.35
AL139260.3-202ENST00000454994 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
AL139260.3-202ENST00000454994 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
AL139260.3-202ENST00000454994 GSE1Q14687 1217 aa17.21■□□□□ 0.35
AL139260.3-202ENST00000454994 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
AL139260.3-202ENST00000454994 FCHSD2O94868 740 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms