RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
SNRNP27-203ENST00000450162 ZNF772Q68DY9 489 aaPredicted RBP18.25■□□□□ 0.51
SNRNP27-203ENST00000450162 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
SNRNP27-203ENST00000450162 TRPM3Q9HCF6 1732 aaPredicted RBP18.25■□□□□ 0.51
SNRNP27-203ENST00000450162 USP6P35125 1406 aa18.24■□□□□ 0.51
SNRNP27-203ENST00000450162 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
SNRNP27-203ENST00000450162 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
SNRNP27-203ENST00000450162 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
SNRNP27-203ENST00000450162 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
SNRNP27-203ENST00000450162 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
SNRNP27-203ENST00000450162 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
SNRNP27-203ENST00000450162 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
SNRNP27-203ENST00000450162 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
SNRNP27-203ENST00000450162 RGS17Q9UGC6 210 aaPredicted RBP18.22■□□□□ 0.51
SNRNP27-203ENST00000450162 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
SNRNP27-203ENST00000450162 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
SNRNP27-203ENST00000450162 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
SNRNP27-203ENST00000450162 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
SNRNP27-203ENST00000450162 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
SNRNP27-203ENST00000450162 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
SNRNP27-203ENST00000450162 FNBP4Q8N3X1 1017 aaPredicted RBP18.2■□□□□ 0.5
SNRNP27-203ENST00000450162 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
SNRNP27-203ENST00000450162 AFF2P51816 1311 aa18.19■□□□□ 0.5
SNRNP27-203ENST00000450162 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
SNRNP27-203ENST00000450162 NLRP6P59044 892 aa18.17■□□□□ 0.5
SNRNP27-203ENST00000450162 CD163L1Q9NR16 1453 aa18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 USP21Q9UK80 565 aa18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 USP19O94966 1318 aa18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
SNRNP27-203ENST00000450162 AKAP12Q02952 1782 aa18.14■□□□□ 0.5
SNRNP27-203ENST00000450162 NUTM2GQ5VZR2 741 aa18.14■□□□□ 0.49
SNRNP27-203ENST00000450162 POTEAQ6S8J7 498 aa18.14■□□□□ 0.49
SNRNP27-203ENST00000450162 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
SNRNP27-203ENST00000450162 GCP02774 474 aa18.13■□□□□ 0.49
SNRNP27-203ENST00000450162 QTRT2Q9H974 415 aaKnown RBP18.13■□□□□ 0.49
SNRNP27-203ENST00000450162 FAM83GA6ND36 823 aa18.12■□□□□ 0.49
SNRNP27-203ENST00000450162 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
SNRNP27-203ENST00000450162 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
SNRNP27-203ENST00000450162 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
SNRNP27-203ENST00000450162 UNC5CLQ8IV45 518 aa18.11■□□□□ 0.49
SNRNP27-203ENST00000450162 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
SNRNP27-203ENST00000450162 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
SNRNP27-203ENST00000450162 SLIT2O94813 1529 aa18.11■□□□□ 0.49
SNRNP27-203ENST00000450162 MON2Q7Z3U7 1717 aa18.1■□□□□ 0.49
SNRNP27-203ENST00000450162 CPDO75976 1380 aa18.1■□□□□ 0.49
SNRNP27-203ENST00000450162 RXRBP28702 533 aa18.1■□□□□ 0.49
SNRNP27-203ENST00000450162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNRNP27-203ENST00000450162 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
SNRNP27-203ENST00000450162 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
SNRNP27-203ENST00000450162 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
SNRNP27-203ENST00000450162 ILDR2Q71H61 639 aa18.09■□□□□ 0.49
SNRNP27-203ENST00000450162 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.49
SNRNP27-203ENST00000450162 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
SNRNP27-203ENST00000450162 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
SNRNP27-203ENST00000450162 ZC3H6P61129 1189 aaKnown RBP18.07■□□□□ 0.48
SNRNP27-203ENST00000450162 ZEB1P37275 1124 aaPredicted RBP18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 NME9Q86XW9 330 aa18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 SLIT3O75094 1523 aa18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 ATRNO75882 1429 aa18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
SNRNP27-203ENST00000450162 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
SNRNP27-203ENST00000450162 COL14A1Q05707 1796 aaKnown RBP18.05■□□□□ 0.48
SNRNP27-203ENST00000450162 VPS72Q15906 364 aa18.05■□□□□ 0.48
SNRNP27-203ENST00000450162 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
SNRNP27-203ENST00000450162 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
SNRNP27-203ENST00000450162 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
SNRNP27-203ENST00000450162 COG3Q96JB2 828 aa18.04■□□□□ 0.48
SNRNP27-203ENST00000450162 GJD4Q96KN9 370 aaPredicted RBP18.04■□□□□ 0.48
SNRNP27-203ENST00000450162 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
SNRNP27-203ENST00000450162 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
SNRNP27-203ENST00000450162 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
SNRNP27-203ENST00000450162 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
SNRNP27-203ENST00000450162 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
SNRNP27-203ENST00000450162 FYB1O15117 783 aa18.02■□□□□ 0.48
SNRNP27-203ENST00000450162 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
SNRNP27-203ENST00000450162 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
SNRNP27-203ENST00000450162 CARD14Q9BXL6 1004 aa18.01■□□□□ 0.47
SNRNP27-203ENST00000450162 USP54Q70EL1 1684 aa18.01■□□□□ 0.47
SNRNP27-203ENST00000450162 CGNL1Q0VF96 1302 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 OVOS2A0A0J9YW53 1432 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 OVOS2Q6IE36 1432 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 EVA1CP58658 441 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
SNRNP27-203ENST00000450162 MYOM1P52179 1685 aa17.99■□□□□ 0.47
SNRNP27-203ENST00000450162 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
SNRNP27-203ENST00000450162 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
SNRNP27-203ENST00000450162 PANK3Q9H999 370 aa17.98■□□□□ 0.47
SNRNP27-203ENST00000450162 CCDC9Q9Y3X0 531 aaKnown RBP17.98■□□□□ 0.47
SNRNP27-203ENST00000450162 SOCS7O14512 581 aa17.97■□□□□ 0.47
SNRNP27-203ENST00000450162 SOX12O15370 315 aa17.97■□□□□ 0.47
SNRNP27-203ENST00000450162 ONECUT3O60422 494 aaPredicted RBP17.96■□□□□ 0.47
SNRNP27-203ENST00000450162 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
SNRNP27-203ENST00000450162 NFAT5O94916 1531 aa17.96■□□□□ 0.47
SNRNP27-203ENST00000450162 ABCC6O95255 1503 aa17.96■□□□□ 0.47
SNRNP27-203ENST00000450162 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.46
SNRNP27-203ENST00000450162 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms