RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 HMOX1P09601 288 aa12.07□□□□□ -0.48
KLHL3-202ENST00000447439 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
KLHL3-202ENST00000447439 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
KLHL3-202ENST00000447439 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
KLHL3-202ENST00000447439 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
KLHL3-202ENST00000447439 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
KLHL3-202ENST00000447439 TRIM27P14373 513 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
KLHL3-202ENST00000447439 NOB1Q9ULX3 412 aaKnown RBP12.06□□□□□ -0.48
KLHL3-202ENST00000447439 PTPRMP28827 1452 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 YTHDC2Q9H6S0 1430 aaKnown RBP12.06□□□□□ -0.48
KLHL3-202ENST00000447439 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 NEO1Q92859 1461 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 CD163L1Q9NR16 1453 aa12.06□□□□□ -0.48
KLHL3-202ENST00000447439 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
KLHL3-202ENST00000447439 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
KLHL3-202ENST00000447439 PMFBP1Q8TBY8 1022 aa12.05□□□□□ -0.48
KLHL3-202ENST00000447439 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
KLHL3-202ENST00000447439 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
KLHL3-202ENST00000447439 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
KLHL3-202ENST00000447439 NSD2O96028 1365 aa12.04□□□□□ -0.48
KLHL3-202ENST00000447439 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
KLHL3-202ENST00000447439 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
KLHL3-202ENST00000447439 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
KLHL3-202ENST00000447439 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
KLHL3-202ENST00000447439 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
KLHL3-202ENST00000447439 COL3A1P02461 1466 aaPredicted RBP12.03□□□□□ -0.48
KLHL3-202ENST00000447439 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
KLHL3-202ENST00000447439 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
KLHL3-202ENST00000447439 PUS7Q96PZ0 661 aaKnown RBP12.03□□□□□ -0.48
KLHL3-202ENST00000447439 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
KLHL3-202ENST00000447439 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.48
KLHL3-202ENST00000447439 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
KLHL3-202ENST00000447439 TMEM131LA2VDJ0 1609 aa12.02□□□□□ -0.49
KLHL3-202ENST00000447439 NLRP1Q9C000 1473 aa12.02□□□□□ -0.49
KLHL3-202ENST00000447439 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
KLHL3-202ENST00000447439 NME9Q86XW9 330 aa12.02□□□□□ -0.49
KLHL3-202ENST00000447439 GSE1Q14687 1217 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 ATF7IPQ6VMQ6 1270 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
KLHL3-202ENST00000447439 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
KLHL3-202ENST00000447439 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
KLHL3-202ENST00000447439 ALKQ9UM73 1620 aa12□□□□□ -0.49
KLHL3-202ENST00000447439 NUTM2FA1L443 756 aa12□□□□□ -0.49
KLHL3-202ENST00000447439 RRS1Q15050 365 aaKnown RBP12□□□□□ -0.49
KLHL3-202ENST00000447439 ZFYVE9O95405 1425 aa11.99□□□□□ -0.49
KLHL3-202ENST00000447439 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
KLHL3-202ENST00000447439 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
KLHL3-202ENST00000447439 ARHGEF40Q8TER5 1519 aa11.98□□□□□ -0.49
KLHL3-202ENST00000447439 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
KLHL3-202ENST00000447439 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 TBC1D32Q96NH3 1257 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
KLHL3-202ENST00000447439 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.49
KLHL3-202ENST00000447439 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
KLHL3-202ENST00000447439 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.49
KLHL3-202ENST00000447439 SOX12O15370 315 aa11.96□□□□□ -0.5
KLHL3-202ENST00000447439 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.5
KLHL3-202ENST00000447439 ARXQ96QS3 562 aa11.96□□□□□ -0.5
KLHL3-202ENST00000447439 TSPOAP1O95153 1857 aa11.96□□□□□ -0.5
KLHL3-202ENST00000447439 METP08581 1390 aa11.96□□□□□ -0.5
KLHL3-202ENST00000447439 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
KLHL3-202ENST00000447439 ZBTB40Q9NUA8 1239 aa11.95□□□□□ -0.5
KLHL3-202ENST00000447439 PNPLA6Q8IY17 1366 aa11.95□□□□□ -0.5
KLHL3-202ENST00000447439 RIMS2Q9UQ26 1411 aa11.95□□□□□ -0.5
KLHL3-202ENST00000447439 FCHSD2O94868 740 aa11.94□□□□□ -0.5
KLHL3-202ENST00000447439 BECN1Q14457 450 aa11.94□□□□□ -0.5
KLHL3-202ENST00000447439 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
KLHL3-202ENST00000447439 A2ML1A8K2U0 1454 aa11.94□□□□□ -0.5
KLHL3-202ENST00000447439 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 CT47B1P0C2W7 299 aaPredicted RBP11.93□□□□□ -0.5
KLHL3-202ENST00000447439 HDAC1Q13547 482 aaPredicted RBP11.93□□□□□ -0.5
KLHL3-202ENST00000447439 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
KLHL3-202ENST00000447439 IL13P35225 146 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 AAMPQ13685 434 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 NUDT16Q96DE0 195 aaKnown RBP11.93□□□□□ -0.5
KLHL3-202ENST00000447439 C22orf23Q9BZE7 217 aa11.93□□□□□ -0.5
KLHL3-202ENST00000447439 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 C8orf58Q8NAV2 365 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 IL16Q14005 1332 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 VAMP4O75379 141 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
KLHL3-202ENST00000447439 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
KLHL3-202ENST00000447439 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
KLHL3-202ENST00000447439 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
KLHL3-202ENST00000447439 ANKRD45Q5TZF3 282 aa11.91□□□□□ -0.5
KLHL3-202ENST00000447439 MED14O60244 1454 aa11.9□□□□□ -0.5
KLHL3-202ENST00000447439 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms