RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-205ENST00000436368 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
RBFOX1-205ENST00000436368 FAM135BQ49AJ0 1406 aa20.2■□□□□ 0.82
RBFOX1-205ENST00000436368 U2SURPO15042 1029 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-205ENST00000436368 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
RBFOX1-205ENST00000436368 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-205ENST00000436368 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
RBFOX1-205ENST00000436368 TSPOAP1O95153 1857 aa20.17■□□□□ 0.82
RBFOX1-205ENST00000436368 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
RBFOX1-205ENST00000436368 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
RBFOX1-205ENST00000436368 TECPR2O15040 1411 aa20.16■□□□□ 0.82
RBFOX1-205ENST00000436368 SETD1AO15047 1707 aaKnown RBP20.16■□□□□ 0.82
RBFOX1-205ENST00000436368 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-205ENST00000436368 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-205ENST00000436368 FCHSD2O94868 740 aa20.15■□□□□ 0.82
RBFOX1-205ENST00000436368 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-205ENST00000436368 CABP1Q9NZU7 370 aa20.15■□□□□ 0.82
RBFOX1-205ENST00000436368 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
RBFOX1-205ENST00000436368 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.81
RBFOX1-205ENST00000436368 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.81
RBFOX1-205ENST00000436368 TNRQ92752 1358 aa20.13■□□□□ 0.81
RBFOX1-205ENST00000436368 ZNF428Q96B54 188 aa20.13■□□□□ 0.81
RBFOX1-205ENST00000436368 RWDD1Q9H446 243 aaPredicted RBP20.13■□□□□ 0.81
RBFOX1-205ENST00000436368 CPS1P31327 1500 aa20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 COG6Q9Y2V7 657 aa20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 PANK1Q8TE04 598 aa20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
RBFOX1-205ENST00000436368 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
RBFOX1-205ENST00000436368 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
RBFOX1-205ENST00000436368 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-205ENST00000436368 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
RBFOX1-205ENST00000436368 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-205ENST00000436368 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-205ENST00000436368 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-205ENST00000436368 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
RBFOX1-205ENST00000436368 RGS3P49796 1198 aa20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 MLECQ14165 292 aa20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 MVPQ14764 893 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 C8orf34Q49A92 452 aa20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-205ENST00000436368 RIPK4P57078 832 aa20.07■□□□□ 0.8
RBFOX1-205ENST00000436368 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
RBFOX1-205ENST00000436368 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
RBFOX1-205ENST00000436368 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
RBFOX1-205ENST00000436368 DDX19BQ9UMR2 479 aa20.06■□□□□ 0.8
RBFOX1-205ENST00000436368 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
RBFOX1-205ENST00000436368 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
RBFOX1-205ENST00000436368 LRRC7Q96NW7 1537 aa20.05■□□□□ 0.8
RBFOX1-205ENST00000436368 WAPLQ7Z5K2 1190 aa20.04■□□□□ 0.8
RBFOX1-205ENST00000436368 COG3Q96JB2 828 aa20.04■□□□□ 0.8
RBFOX1-205ENST00000436368 CCDC61Q9Y6R9 512 aa20.04■□□□□ 0.8
RBFOX1-205ENST00000436368 IGHDP01880 384 aa20.03■□□□□ 0.8
RBFOX1-205ENST00000436368 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
RBFOX1-205ENST00000436368 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
RBFOX1-205ENST00000436368 NBR1Q14596 966 aa20.02■□□□□ 0.8
RBFOX1-205ENST00000436368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.02■□□□□ 0.8
RBFOX1-205ENST00000436368 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
RBFOX1-205ENST00000436368 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
RBFOX1-205ENST00000436368 METP08581 1390 aa20.02■□□□□ 0.79
RBFOX1-205ENST00000436368 NFE2L2Q16236 605 aa20.02■□□□□ 0.79
RBFOX1-205ENST00000436368 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.79
RBFOX1-205ENST00000436368 RSPH6AQ9H0K4 717 aa20.02■□□□□ 0.79
RBFOX1-205ENST00000436368 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.79
RBFOX1-205ENST00000436368 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
RBFOX1-205ENST00000436368 ATF7IPQ6VMQ6 1270 aa20.01■□□□□ 0.79
RBFOX1-205ENST00000436368 MON2Q7Z3U7 1717 aa20■□□□□ 0.79
RBFOX1-205ENST00000436368 PRKAR2BP31323 418 aa19.99■□□□□ 0.79
RBFOX1-205ENST00000436368 GNAI1P63096 354 aa19.99■□□□□ 0.79
RBFOX1-205ENST00000436368 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
RBFOX1-205ENST00000436368 BCL2L13Q9BXK5 485 aa19.99■□□□□ 0.79
RBFOX1-205ENST00000436368 ITSN1Q15811 1721 aa19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 UBR1Q8IWV7 1749 aa19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 VIRMAQ69YN4 1812 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 RLBP1P12271 317 aa19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 BRPF1P55201 1214 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-205ENST00000436368 HDAC1Q13547 482 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 TXNDC2Q86VQ3 553 aa19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 BECN1Q14457 450 aa19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 SSH1Q8WYL5 1049 aa19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
RBFOX1-205ENST00000436368 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
RBFOX1-205ENST00000436368 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
RBFOX1-205ENST00000436368 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
RBFOX1-205ENST00000436368 PCDHB15Q9Y5E8 787 aa19.95■□□□□ 0.78
RBFOX1-205ENST00000436368 TRIM27P14373 513 aa19.94■□□□□ 0.78
RBFOX1-205ENST00000436368 IL13P35225 146 aa19.94■□□□□ 0.78
RBFOX1-205ENST00000436368 DEKP35659 375 aaKnown RBP19.94■□□□□ 0.78
RBFOX1-205ENST00000436368 ARHGAP45Q92619 1136 aa19.94■□□□□ 0.78
RBFOX1-205ENST00000436368 C3P01024 1663 aa19.94■□□□□ 0.78
RBFOX1-205ENST00000436368 NRKQ7Z2Y5 1582 aa19.93■□□□□ 0.78
RBFOX1-205ENST00000436368 NME9Q86XW9 330 aa19.92■□□□□ 0.78
RBFOX1-205ENST00000436368 PDZRN3Q9UPQ7 1066 aa19.92■□□□□ 0.78
RBFOX1-205ENST00000436368 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
RBFOX1-205ENST00000436368 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
RBFOX1-205ENST00000436368 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms