RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HDGFL2Q7Z4V5 671 aaPredicted RBP24.03■■□□□ 1.44
CLK1-205ENST00000434813 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
CLK1-205ENST00000434813 UBR1Q8IWV7 1749 aa24.03■■□□□ 1.44
CLK1-205ENST00000434813 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
CLK1-205ENST00000434813 C3P01024 1663 aa24.03■■□□□ 1.44
CLK1-205ENST00000434813 ADAMTSL3P82987 1691 aa24.01■■□□□ 1.43
CLK1-205ENST00000434813 CLUAP1Q96AJ1 413 aa24.01■■□□□ 1.43
CLK1-205ENST00000434813 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
CLK1-205ENST00000434813 CDC42BPGQ6DT37 1551 aa24.01■■□□□ 1.43
CLK1-205ENST00000434813 PNPLA6Q8IY17 1366 aa24■■□□□ 1.43
CLK1-205ENST00000434813 AAMPQ13685 434 aa24■■□□□ 1.43
CLK1-205ENST00000434813 PANK1Q8TE04 598 aa23.99■■□□□ 1.43
CLK1-205ENST00000434813 FAM161AQ3B820 660 aa23.98■■□□□ 1.43
CLK1-205ENST00000434813 COG6Q9Y2V7 657 aa23.98■■□□□ 1.43
CLK1-205ENST00000434813 KNDC1Q76NI1 1749 aa23.97■■□□□ 1.43
CLK1-205ENST00000434813 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
CLK1-205ENST00000434813 U2SURPO15042 1029 aaKnown RBP23.96■■□□□ 1.43
CLK1-205ENST00000434813 CT47B1P0C2W7 299 aaPredicted RBP23.96■■□□□ 1.43
CLK1-205ENST00000434813 C8orf34Q49A92 452 aa23.96■■□□□ 1.43
CLK1-205ENST00000434813 FRAT1Q92837 279 aaPredicted RBP23.96■■□□□ 1.43
CLK1-205ENST00000434813 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.42
CLK1-205ENST00000434813 IGHDP01880 384 aa23.94■■□□□ 1.42
CLK1-205ENST00000434813 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
CLK1-205ENST00000434813 EID1Q9Y6B2 187 aa23.94■■□□□ 1.42
CLK1-205ENST00000434813 MAPK8IP3Q9UPT6 1336 aa23.94■■□□□ 1.42
CLK1-205ENST00000434813 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
CLK1-205ENST00000434813 METP08581 1390 aa23.93■■□□□ 1.42
CLK1-205ENST00000434813 RIMS1Q86UR5 1692 aaKnown RBP23.93■■□□□ 1.42
CLK1-205ENST00000434813 IL16Q14005 1332 aa23.92■■□□□ 1.42
CLK1-205ENST00000434813 DIAPH1O60610 1272 aaKnown RBP23.91■■□□□ 1.42
CLK1-205ENST00000434813 RGS3P49796 1198 aa23.91■■□□□ 1.42
CLK1-205ENST00000434813 WAPLQ7Z5K2 1190 aa23.91■■□□□ 1.42
CLK1-205ENST00000434813 TXNDC2Q86VQ3 553 aa23.91■■□□□ 1.42
CLK1-205ENST00000434813 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
CLK1-205ENST00000434813 TRIM35Q9UPQ4 493 aa23.91■■□□□ 1.42
CLK1-205ENST00000434813 TECPR2O15040 1411 aa23.9■■□□□ 1.42
CLK1-205ENST00000434813 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
CLK1-205ENST00000434813 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
CLK1-205ENST00000434813 PNNQ9H307 717 aaKnown RBP23.9■■□□□ 1.42
CLK1-205ENST00000434813 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
CLK1-205ENST00000434813 RLBP1P12271 317 aa23.89■■□□□ 1.42
CLK1-205ENST00000434813 LTKP29376 864 aa23.89■■□□□ 1.42
CLK1-205ENST00000434813 CPS1P31327 1500 aa23.89■■□□□ 1.42
CLK1-205ENST00000434813 NBR1Q14596 966 aa23.89■■□□□ 1.41
CLK1-205ENST00000434813 FAM135BQ49AJ0 1406 aa23.89■■□□□ 1.41
CLK1-205ENST00000434813 EDC4Q6P2E9 1401 aaKnown RBP23.89■■□□□ 1.41
CLK1-205ENST00000434813 BCL2L13Q9BXK5 485 aa23.88■■□□□ 1.41
CLK1-205ENST00000434813 PMFBP1Q8TBY8 1022 aa23.88■■□□□ 1.41
CLK1-205ENST00000434813 SLIT1O75093 1534 aa23.87■■□□□ 1.41
CLK1-205ENST00000434813 MON2Q7Z3U7 1717 aa23.86■■□□□ 1.41
CLK1-205ENST00000434813 PPIP5K1Q6PFW1 1433 aa23.86■■□□□ 1.41
CLK1-205ENST00000434813 TSR2Q969E8 191 aaKnown RBP23.86■■□□□ 1.41
CLK1-205ENST00000434813 TNNQ9UQP3 1299 aa23.86■■□□□ 1.41
CLK1-205ENST00000434813 WASLO00401 505 aaPredicted RBP23.85■■□□□ 1.41
CLK1-205ENST00000434813 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
CLK1-205ENST00000434813 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
CLK1-205ENST00000434813 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
CLK1-205ENST00000434813 SIRT1Q96EB6 747 aa23.84■■□□□ 1.41
CLK1-205ENST00000434813 FCHSD2O94868 740 aa23.83■■□□□ 1.41
CLK1-205ENST00000434813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
CLK1-205ENST00000434813 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
CLK1-205ENST00000434813 MAP2P11137 1827 aaKnown RBP23.83■■□□□ 1.41
CLK1-205ENST00000434813 CDK12Q9NYV4 1490 aaPredicted RBP23.83■■□□□ 1.4
CLK1-205ENST00000434813 EXOSC9Q06265 439 aaKnown RBP23.83■■□□□ 1.4
CLK1-205ENST00000434813 MVPQ14764 893 aaKnown RBP23.83■■□□□ 1.4
CLK1-205ENST00000434813 RIPK4P57078 832 aa23.82■■□□□ 1.4
CLK1-205ENST00000434813 PCDHB15Q9Y5E8 787 aa23.82■■□□□ 1.4
CLK1-205ENST00000434813 AKAP12Q02952 1782 aa23.82■■□□□ 1.4
CLK1-205ENST00000434813 ITSN1Q15811 1721 aa23.8■■□□□ 1.4
CLK1-205ENST00000434813 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
CLK1-205ENST00000434813 AATKQ6ZMQ8 1374 aa23.8■■□□□ 1.4
CLK1-205ENST00000434813 DZIP1LQ8IYY4 767 aaKnown RBP23.79■■□□□ 1.4
CLK1-205ENST00000434813 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
CLK1-205ENST00000434813 SMC4Q9NTJ3 1288 aa23.79■■□□□ 1.4
CLK1-205ENST00000434813 RTL5Q5HYW3 569 aaPredicted RBP23.79■■□□□ 1.4
CLK1-205ENST00000434813 FTSJ3Q8IY81 847 aaKnown RBP23.78■■□□□ 1.4
CLK1-205ENST00000434813 CEP170BQ9Y4F5 1589 aaPredicted RBP23.78■■□□□ 1.4
CLK1-205ENST00000434813 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
CLK1-205ENST00000434813 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
CLK1-205ENST00000434813 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
CLK1-205ENST00000434813 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
CLK1-205ENST00000434813 PPM1GO15355 546 aaPredicted RBP23.75■■□□□ 1.39
CLK1-205ENST00000434813 NUDT16Q96DE0 195 aaKnown RBP23.75■■□□□ 1.39
CLK1-205ENST00000434813 TBX22Q9Y458 520 aa23.75■■□□□ 1.39
CLK1-205ENST00000434813 NEFMP07197 916 aa23.74■■□□□ 1.39
CLK1-205ENST00000434813 TRIM27P14373 513 aa23.74■■□□□ 1.39
CLK1-205ENST00000434813 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
CLK1-205ENST00000434813 DEKP35659 375 aaKnown RBP23.74■■□□□ 1.39
CLK1-205ENST00000434813 NME9Q86XW9 330 aa23.74■■□□□ 1.39
CLK1-205ENST00000434813 CCDC61Q9Y6R9 512 aa23.74■■□□□ 1.39
CLK1-205ENST00000434813 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
CLK1-205ENST00000434813 ATF7IPQ6VMQ6 1270 aa23.73■■□□□ 1.39
CLK1-205ENST00000434813 LAS1LQ9Y4W2 734 aaKnown RBP23.73■■□□□ 1.39
CLK1-205ENST00000434813 TOPAZ1Q8N9V7 1692 aa23.72■■□□□ 1.39
CLK1-205ENST00000434813 NRKQ7Z2Y5 1582 aa23.72■■□□□ 1.39
CLK1-205ENST00000434813 FBLN1P23142 703 aa23.72■■□□□ 1.39
CLK1-205ENST00000434813 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
CLK1-205ENST00000434813 EMILIN1Q9Y6C2 1016 aa23.72■■□□□ 1.39
CLK1-205ENST00000434813 NFE2L2Q16236 605 aa23.71■■□□□ 1.39
CLK1-205ENST00000434813 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms