RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
SCRN1-207ENST00000434476 IL16Q14005 1332 aa17.1■□□□□ 0.33
SCRN1-207ENST00000434476 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
SCRN1-207ENST00000434476 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
SCRN1-207ENST00000434476 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
SCRN1-207ENST00000434476 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
SCRN1-207ENST00000434476 CPS1P31327 1500 aa17.09■□□□□ 0.33
SCRN1-207ENST00000434476 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
SCRN1-207ENST00000434476 FCHSD2O94868 740 aa17.09■□□□□ 0.33
SCRN1-207ENST00000434476 PDE4AP27815 886 aa17.09■□□□□ 0.33
SCRN1-207ENST00000434476 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
SCRN1-207ENST00000434476 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
SCRN1-207ENST00000434476 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.33
SCRN1-207ENST00000434476 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.33
SCRN1-207ENST00000434476 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
SCRN1-207ENST00000434476 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
SCRN1-207ENST00000434476 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
SCRN1-207ENST00000434476 BACH2Q9BYV9 841 aa17.08■□□□□ 0.32
SCRN1-207ENST00000434476 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
SCRN1-207ENST00000434476 CDC42BPGQ6DT37 1551 aa17.07■□□□□ 0.32
SCRN1-207ENST00000434476 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
SCRN1-207ENST00000434476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCRN1-207ENST00000434476 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
SCRN1-207ENST00000434476 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
SCRN1-207ENST00000434476 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
SCRN1-207ENST00000434476 ADAMTS13Q76LX8 1427 aa17.05■□□□□ 0.32
SCRN1-207ENST00000434476 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
SCRN1-207ENST00000434476 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
SCRN1-207ENST00000434476 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
SCRN1-207ENST00000434476 NEFMP07197 916 aa17.02■□□□□ 0.32
SCRN1-207ENST00000434476 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
SCRN1-207ENST00000434476 LTKP29376 864 aa17.01■□□□□ 0.31
SCRN1-207ENST00000434476 RIPK4P57078 832 aa17.01■□□□□ 0.31
SCRN1-207ENST00000434476 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
SCRN1-207ENST00000434476 COG3Q96JB2 828 aa17.01■□□□□ 0.31
SCRN1-207ENST00000434476 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
SCRN1-207ENST00000434476 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 NME9Q86XW9 330 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
SCRN1-207ENST00000434476 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
SCRN1-207ENST00000434476 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 SLIT1O75093 1534 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 IL13P35225 146 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
SCRN1-207ENST00000434476 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
SCRN1-207ENST00000434476 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
SCRN1-207ENST00000434476 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
SCRN1-207ENST00000434476 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
SCRN1-207ENST00000434476 PRR36Q9H6K5 1346 aa16.98■□□□□ 0.31
SCRN1-207ENST00000434476 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
SCRN1-207ENST00000434476 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
SCRN1-207ENST00000434476 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
SCRN1-207ENST00000434476 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
SCRN1-207ENST00000434476 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
SCRN1-207ENST00000434476 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
SCRN1-207ENST00000434476 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
SCRN1-207ENST00000434476 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
SCRN1-207ENST00000434476 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
SCRN1-207ENST00000434476 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
SCRN1-207ENST00000434476 IGHDP01880 384 aa16.95■□□□□ 0.3
SCRN1-207ENST00000434476 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
SCRN1-207ENST00000434476 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
SCRN1-207ENST00000434476 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
SCRN1-207ENST00000434476 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
SCRN1-207ENST00000434476 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
SCRN1-207ENST00000434476 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 C3P01024 1663 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 FBLN1P23142 703 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
SCRN1-207ENST00000434476 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
SCRN1-207ENST00000434476 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
SCRN1-207ENST00000434476 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
SCRN1-207ENST00000434476 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
SCRN1-207ENST00000434476 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
SCRN1-207ENST00000434476 RLBP1P12271 317 aa16.92■□□□□ 0.3
SCRN1-207ENST00000434476 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
SCRN1-207ENST00000434476 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
SCRN1-207ENST00000434476 PTCH1Q13635 1447 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 ACEP12821 1306 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 IPO8O15397 1037 aaKnown RBP16.91■□□□□ 0.3
SCRN1-207ENST00000434476 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-207ENST00000434476 SKAP1Q86WV1 359 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 SLC26A8Q96RN1 970 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
SCRN1-207ENST00000434476 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-207ENST00000434476 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
SCRN1-207ENST00000434476 USP6P35125 1406 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 GNAI1P63096 354 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 FTSJ3Q8IY81 847 aaKnown RBP16.89■□□□□ 0.29
SCRN1-207ENST00000434476 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms